G219559


Basic Information

Item Value
gene id G219559
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 4277420 ~ 4278285 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU249031
TTACATCTGACCCAGGATCTGGGTAACACAAAGACTACCCAAACACTGGGTTATTACGTCTGACCCAGGATCTGGGTAACACAAAAACTACCCAAACACTGGGTTGTTACGTCTGACCCAGGATCTGGGTAACACAAAAACTACCCAAACCCTGGGTTGTTACGTCTGACCCAGGATCTGGGTAACACAAAAACTACCCAAACACTGGGTTGTTACGTCTGACCCAGGATCTGGGTAACACAAAAAATACCCAAACACTGGGTTGTTACGTCTGACCCAGGATCTGGG
>TU249032
CCTGGGTTATTACGTCTGACCCAGGATCTGGGTAACACAAAAACTACCCAAACACTGGGTTGTTACGTCTGACCCAGGATCTGGGTAACACAAAAACTACCCAAACCCTGGGTTGTTACGTCTGACCCAGGATCTGGGTAACACAAAAACTACCCAAACACTGGGTTGTTACGTCTGACCCAGGATCTGGGTAACACAAAAAATACCCAAACACTGGGTTGTTACGTCTGACCCAGGATCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249031 False 288 lncRNA 0.48 3 4277420 4278285
TU249032 True 244 lncRNA 0.48 2 4277933 4278285

Neighbor

gene id symbol gene type direction distance location
CI01000051_04155754_04157992 NFKBIAA coding upstream 119091 4155684 ~ 4158329 (+)
CI01000051_04094412_04101387 CALM2, CALM3, CALM1 coding upstream 175904 4094354 ~ 4101516 (+)
CI01000051_04081532_04085798 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding upstream 191498 4081532 ~ 4085922 (+)
CI01000051_04071144_04075444 KCNK13B coding upstream 200295 4070951 ~ 4077125 (+)
CI01000051_04038453_04045552 TMEM30A, TMEM30AA, TMEM30AB coding upstream 230892 4038407 ~ 4046528 (+)
CI01000051_04374052_04393328 NA coding downstream 94373 4372658 ~ 4393677 (+)
CI01000051_04419475_04464134 NA coding downstream 140985 4419270 ~ 4464166 (+)
CI01000051_04763063_04778692 NA coding downstream 484211 4762496 ~ 4779082 (+)
CI01000051_04796878_04799272 FLRT2 coding downstream 518593 4796878 ~ 4799321 (+)
CI01000051_05072860_05074568 GLRX5 coding downstream 794344 5072629 ~ 5074874 (+)
G219552 NA non-coding upstream 20439 4256760 ~ 4256981 (+)
G219547 NA non-coding upstream 27335 4249866 ~ 4250085 (+)
G219543 NA non-coding upstream 29601 4247618 ~ 4247819 (+)
G219539 NA non-coding upstream 31571 4245178 ~ 4245849 (+)
G219534 NA non-coding upstream 40303 4236696 ~ 4237117 (+)
G219563 NA non-coding downstream 8802 4287087 ~ 4287400 (+)
G219564 NA non-coding downstream 13364 4291649 ~ 4291855 (+)
G219580 NA non-coding downstream 54537 4332822 ~ 4333037 (+)
G219581 NA non-coding downstream 61628 4339913 ~ 4340113 (+)
G219584 NA non-coding downstream 65654 4343939 ~ 4344191 (+)
G218981 NA other upstream 1030547 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 2211337 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 3552716 637590 ~ 720669 (+)
G217075 NA other upstream 3893292 324465 ~ 384128 (+)
G219803 NA other downstream 636689 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 2547514 6825895 ~ 6830637 (+)
G221319 NA other downstream 3063756 7342041 ~ 7342546 (+)
G221386 NA other downstream 3131238 7401175 ~ 7413007 (+)

Expression


Co-expression Network