G219585


Basic Information

Item Value
gene id G219585
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 4344324 ~ 4344534 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU249064
CTCTCTTGAACAGTAAATAGATTTACTGTAGTTTTTGTTAGTAGATTGAATTGCAGCTAACTACTTTTTTAAAGGGGTAGCTTGACTATAGATTAACTTAAATTACAGTTAACTTATAGCTTGGCAAGCTGCAGTTTCAAAGTACATTCCCGGACACTGGAAAGAACTGACCACATTGCATTTCTAATTTACAACCTCTGATGAAAAATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249064 True 211 lncRNA 0.34 1 4344324 4344534

Neighbor

gene id symbol gene type direction distance location
CI01000051_04155754_04157992 NFKBIAA coding upstream 185995 4155684 ~ 4158329 (+)
CI01000051_04094412_04101387 CALM2, CALM3, CALM1 coding upstream 242808 4094354 ~ 4101516 (+)
CI01000051_04081532_04085798 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding upstream 258402 4081532 ~ 4085922 (+)
CI01000051_04071144_04075444 KCNK13B coding upstream 267199 4070951 ~ 4077125 (+)
CI01000051_04038453_04045552 TMEM30A, TMEM30AA, TMEM30AB coding upstream 297796 4038407 ~ 4046528 (+)
CI01000051_04374052_04393328 NA coding downstream 28124 4372658 ~ 4393677 (+)
CI01000051_04419475_04464134 NA coding downstream 74736 4419270 ~ 4464166 (+)
CI01000051_04763063_04778692 NA coding downstream 417962 4762496 ~ 4779082 (+)
CI01000051_04796878_04799272 FLRT2 coding downstream 452344 4796878 ~ 4799321 (+)
CI01000051_05072860_05074568 GLRX5 coding downstream 728095 5072629 ~ 5074874 (+)
G219584 NA non-coding upstream 133 4343939 ~ 4344191 (+)
G219581 NA non-coding upstream 4211 4339913 ~ 4340113 (+)
G219580 NA non-coding upstream 11287 4332822 ~ 4333037 (+)
G219564 NA non-coding upstream 52469 4291649 ~ 4291855 (+)
G219563 NA non-coding upstream 56924 4287087 ~ 4287400 (+)
G219586 NA non-coding downstream 2171 4346705 ~ 4346955 (+)
G219590 NA non-coding downstream 11044 4355578 ~ 4355829 (+)
G219591 NA non-coding downstream 11411 4355945 ~ 4356221 (+)
G219594 NA non-coding downstream 16860 4361394 ~ 4361599 (+)
G219598 NA non-coding downstream 20226 4364760 ~ 4364965 (+)
G218981 NA other upstream 1097451 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 2278241 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 3619620 637590 ~ 720669 (+)
G217075 NA other upstream 3960196 324465 ~ 384128 (+)
G219803 NA other downstream 570440 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 2481265 6825895 ~ 6830637 (+)
G221319 NA other downstream 2997507 7342041 ~ 7342546 (+)
G221386 NA other downstream 3064989 7401175 ~ 7413007 (+)

Expression


Co-expression Network