G219590


Basic Information

Item Value
gene id G219590
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 4355578 ~ 4355829 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU249069
TGGGGAGAAAAATTAGATGACAAAAAATACTTTCATGCCAAGCCCCAAAAAGAGCAGCAGCTGTTAATGTTTGTGAACATTTGTTTGTTAATGTTCAGAACAAGTTTAACTCAATCGAAATGTTGCTGTAATGTTGATTACCACAAAAGTTAATTTAGACTTGAAAAAAAAAAGAAGAAATGAAAAAAAAGTTAAGGTTATGATGAGGCACTAATAAATGTATTAAAAGCACTTGCATTTATTCTATTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249069 True 252 lncRNA 0.29 1 4355578 4355829

Neighbor

gene id symbol gene type direction distance location
CI01000051_04155754_04157992 NFKBIAA coding upstream 197249 4155684 ~ 4158329 (+)
CI01000051_04094412_04101387 CALM2, CALM3, CALM1 coding upstream 254062 4094354 ~ 4101516 (+)
CI01000051_04081532_04085798 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding upstream 269656 4081532 ~ 4085922 (+)
CI01000051_04071144_04075444 KCNK13B coding upstream 278453 4070951 ~ 4077125 (+)
CI01000051_04038453_04045552 TMEM30A, TMEM30AA, TMEM30AB coding upstream 309050 4038407 ~ 4046528 (+)
CI01000051_04374052_04393328 NA coding downstream 16829 4372658 ~ 4393677 (+)
CI01000051_04419475_04464134 NA coding downstream 63441 4419270 ~ 4464166 (+)
CI01000051_04763063_04778692 NA coding downstream 406667 4762496 ~ 4779082 (+)
CI01000051_04796878_04799272 FLRT2 coding downstream 441049 4796878 ~ 4799321 (+)
CI01000051_05072860_05074568 GLRX5 coding downstream 716800 5072629 ~ 5074874 (+)
G219586 NA non-coding upstream 8623 4346705 ~ 4346955 (+)
G219585 NA non-coding upstream 11044 4344324 ~ 4344534 (+)
G219584 NA non-coding upstream 11387 4343939 ~ 4344191 (+)
G219581 NA non-coding upstream 15465 4339913 ~ 4340113 (+)
G219580 NA non-coding upstream 22541 4332822 ~ 4333037 (+)
G219591 NA non-coding downstream 116 4355945 ~ 4356221 (+)
G219594 NA non-coding downstream 5565 4361394 ~ 4361599 (+)
G219598 NA non-coding downstream 8931 4364760 ~ 4364965 (+)
G219606 NA non-coding downstream 24296 4380125 ~ 4380422 (+)
G219615 NA non-coding downstream 66701 4422530 ~ 4422792 (+)
G218981 NA other upstream 1108705 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 2289495 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 3630874 637590 ~ 720669 (+)
G217075 NA other upstream 3971450 324465 ~ 384128 (+)
G219803 NA other downstream 559145 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 2469970 6825895 ~ 6830637 (+)
G221319 NA other downstream 2986212 7342041 ~ 7342546 (+)
G221386 NA other downstream 3053694 7401175 ~ 7413007 (+)

Expression


Co-expression Network