G219594


Basic Information

Item Value
gene id G219594
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 4361394 ~ 4361599 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU249073
GTCCATATTTAAACCAACATTGGTTATTTTTAACCCAGCATTTTAGAGCATAGTTTTGTTCCTGTTGTTTATTAAAATTATCTTTGAATAGTCTTCTTGCGTCATGAAACCCTCTCGCTTTGGATTATCTACACGACAATGTTACAGTACCTAAATATATAATTACAATGTAACAAAGACACCTTAAAATAAAGTGTAACCTGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249073 True 206 lncRNA 0.31 1 4361394 4361599

Neighbor

gene id symbol gene type direction distance location
CI01000051_04155754_04157992 NFKBIAA coding upstream 203065 4155684 ~ 4158329 (+)
CI01000051_04094412_04101387 CALM2, CALM3, CALM1 coding upstream 259878 4094354 ~ 4101516 (+)
CI01000051_04081532_04085798 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding upstream 275472 4081532 ~ 4085922 (+)
CI01000051_04071144_04075444 KCNK13B coding upstream 284269 4070951 ~ 4077125 (+)
CI01000051_04038453_04045552 TMEM30A, TMEM30AA, TMEM30AB coding upstream 314866 4038407 ~ 4046528 (+)
CI01000051_04374052_04393328 NA coding downstream 11059 4372658 ~ 4393677 (+)
CI01000051_04419475_04464134 NA coding downstream 57671 4419270 ~ 4464166 (+)
CI01000051_04763063_04778692 NA coding downstream 400897 4762496 ~ 4779082 (+)
CI01000051_04796878_04799272 FLRT2 coding downstream 435279 4796878 ~ 4799321 (+)
CI01000051_05072860_05074568 GLRX5 coding downstream 711030 5072629 ~ 5074874 (+)
G219591 NA non-coding upstream 5173 4355945 ~ 4356221 (+)
G219590 NA non-coding upstream 5565 4355578 ~ 4355829 (+)
G219586 NA non-coding upstream 14439 4346705 ~ 4346955 (+)
G219585 NA non-coding upstream 16860 4344324 ~ 4344534 (+)
G219584 NA non-coding upstream 17203 4343939 ~ 4344191 (+)
G219598 NA non-coding downstream 3161 4364760 ~ 4364965 (+)
G219606 NA non-coding downstream 18526 4380125 ~ 4380422 (+)
G219615 NA non-coding downstream 60931 4422530 ~ 4422792 (+)
G219616 NA non-coding downstream 66076 4427675 ~ 4427979 (+)
G219620 NA non-coding downstream 87814 4449413 ~ 4449620 (+)
G218981 NA other upstream 1114521 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 2295311 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 3636690 637590 ~ 720669 (+)
G217075 NA other upstream 3977266 324465 ~ 384128 (+)
G219803 NA other downstream 553375 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 2464200 6825895 ~ 6830637 (+)
G221319 NA other downstream 2980442 7342041 ~ 7342546 (+)
G221386 NA other downstream 3047924 7401175 ~ 7413007 (+)

Expression


Co-expression Network