G220850


Basic Information

Item Value
gene id G220850
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5490068 ~ 5490287 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU250472
TGCTAAATGACTACCTACTTACACCCCGGATCTCATTTCTCTCTAAATACTGTGTTTACCTGTGTTGATTGTTACAAGGTGGATGAAATGGCACAGAGTAAGCTGCATTCAAATTTTCCAAGTTAAAAAAAAAAAGCTGACAACAAATTTCCAAAAGTTTGTTGAAGTGCTTGGACCATCTTCACTCAACTACTGGTTCTTATCCAAAAGTCCAAAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250472 True 220 lncRNA 0.36 1 5490068 5490287

Neighbor

gene id symbol gene type direction distance location
CI01000051_05454570_05480649 NA coding upstream 9133 5454532 ~ 5480935 (+)
CI01000051_05401881_05405868 NA coding upstream 84182 5401881 ~ 5405886 (+)
CI01000051_05320361_05322570 GJD2B, GJD2 coding upstream 166163 5320361 ~ 5323905 (+)
CI01000051_05314994_05317995 ACTC1B, ACTA2, ACTA1, MGC53823, ACTC1, MGC75582, ACT3, ACTC1A, ACTA1A, ACT2, ACTC1.L coding upstream 171883 5314444 ~ 5318185 (+)
CI01000051_05296858_05301152 NA coding upstream 188734 5296684 ~ 5301334 (+)
CI01000051_05514127_05516929 ZFP36L1B, ZFP36L1 coding downstream 22469 5512756 ~ 5517785 (+)
CI01000051_05523573_05525861 NA coding downstream 33075 5523362 ~ 5527007 (+)
CI01000051_05579061_05584087 CRIP2 coding downstream 88774 5579061 ~ 5584087 (+)
CI01000051_05588671_05593438 RDH14B coding downstream 98005 5588292 ~ 5593977 (+)
CI01000051_05657394_05672861 SYT14B, SYT14 coding downstream 167107 5657394 ~ 5674202 (+)
G220846 NA non-coding upstream 4347 5485478 ~ 5485721 (+)
G220844 NA non-coding upstream 5942 5483505 ~ 5484126 (+)
G220830 NA non-coding upstream 56858 5432944 ~ 5433210 (+)
G220773 NA non-coding upstream 83396 5348807 ~ 5406672 (+)
G220807 NA non-coding upstream 113543 5375682 ~ 5376525 (+)
G220856 NA non-coding downstream 7817 5498104 ~ 5498659 (+)
G220861 NA non-coding downstream 31570 5521857 ~ 5522786 (+)
G220889 NA non-coding downstream 81171 5571458 ~ 5571737 (+)
G220922 NA non-coding downstream 186177 5676464 ~ 5676963 (+)
G220930 NA non-coding downstream 249292 5739579 ~ 5740171 (+)
G219803 NA other upstream 438035 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 1114738 4372658 ~ 4393677 (+)
G218981 NA other upstream 2243195 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 3423985 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 4765364 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 1335512 6825895 ~ 6830637 (+)
G221319 NA other downstream 1851754 7342041 ~ 7342546 (+)
G221386 NA other downstream 1919236 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 2615356 8209722 ~ 8214696 (+)
G222727 NA other downstream 2852655 8342942 ~ 8343448 (+)

Expression


Co-expression Network