Gene
RNA
| Item | Value |
|---|---|
| gene id | G220889 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 5571458 ~ 5571737 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU250513 | True | 280 | lncRNA | 0.36 | 1 | 5571458 | 5571737 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_05523573_05525861 | NA | coding | upstream | 44451 | 5523362 ~ 5527007 (+) |
| CI01000051_05514127_05516929 | ZFP36L1B, ZFP36L1 | coding | upstream | 53673 | 5512756 ~ 5517785 (+) |
| CI01000051_05454570_05480649 | NA | coding | upstream | 90523 | 5454532 ~ 5480935 (+) |
| CI01000051_05401881_05405868 | NA | coding | upstream | 165572 | 5401881 ~ 5405886 (+) |
| CI01000051_05320361_05322570 | GJD2B, GJD2 | coding | upstream | 247553 | 5320361 ~ 5323905 (+) |
| CI01000051_05579061_05584087 | CRIP2 | coding | downstream | 7324 | 5579061 ~ 5584087 (+) |
| CI01000051_05588671_05593438 | RDH14B | coding | downstream | 16555 | 5588292 ~ 5593977 (+) |
| CI01000051_05657394_05672861 | SYT14B, SYT14 | coding | downstream | 85657 | 5657394 ~ 5674202 (+) |
| CI01000051_05712567_05728993 | YLPM1 | coding | downstream | 140830 | 5712567 ~ 5729691 (+) |
| CI01000051_05757566_05757955 | C12ORF57 | coding | downstream | 185829 | 5757566 ~ 5758141 (+) |
| G220861 | NA | non-coding | upstream | 48672 | 5521857 ~ 5522786 (+) |
| G220856 | NA | non-coding | upstream | 72799 | 5498104 ~ 5498659 (+) |
| G220850 | NA | non-coding | upstream | 81171 | 5490068 ~ 5490287 (+) |
| G220846 | NA | non-coding | upstream | 85737 | 5485478 ~ 5485721 (+) |
| G220844 | NA | non-coding | upstream | 87332 | 5483505 ~ 5484126 (+) |
| G220922 | NA | non-coding | downstream | 104727 | 5676464 ~ 5676963 (+) |
| G220930 | NA | non-coding | downstream | 167842 | 5739579 ~ 5740171 (+) |
| G220916 | NA | non-coding | downstream | 169321 | 5741058 ~ 5744465 (+) |
| G220923 | NA | non-coding | downstream | 217791 | 5789528 ~ 5830106 (+) |
| G220920 | NA | non-coding | downstream | 373853 | 5945590 ~ 5946344 (+) |
| G219803 | NA | other | upstream | 519425 | 4914974 ~ 5052033 (+) |
| CI01000051_04374052_04393328 | NA | other | upstream | 1196128 | 4372658 ~ 4393677 (+) |
| G218981 | NA | other | upstream | 2324585 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 3505375 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 4846754 | 637590 ~ 720669 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 1254062 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 1770304 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 1837786 | 7401175 ~ 7413007 (+) |
| CI01000051_08211233_08214513 | NA | other | downstream | 2533906 | 8209722 ~ 8214696 (+) |
| G222727 | NA | other | downstream | 2771205 | 8342942 ~ 8343448 (+) |
