G220930


Basic Information

Item Value
gene id G220930
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5739579 ~ 5740171 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU250579
ACCTGCGTTCATCTTCAGAACACAAATTAAGATATTTTTGATGAAATCCGAGAGGTATACGACTGAACCTTAAGCAACAAGAATAGAATTTTGTGCGCAAAATCAAAACAAAAATAATTACTTTATTCAACGATATTCATAATTCTGAAGATGAACGAAGGTCTTACGGGTGTGAAACGACATGAGGGTGAGTATTTAATGACAGAATTTTCATTTTTGGGTAAACTACCCTTTAAGTACATTTTGTCTTCAGTAGCTCAGCTGTGTAGCTTTTGTAACAAGATTTCCAAAATGCTGCTGTTTAGCACAGTTTTATTAATCGGGTGTGGTCTTATTTTATTAAATGTATATTTGTGCATAAATATTGACTTTGATGCTGCCACTCTAATATTGTTTCTGTGCCAGACAGTCTAATATTATGATACAAAAACAGTAATTTGACTGCAGTTTGTGCTTTAAATTAACTTTTGTCATAGTAGTTTCCCCAATACTGTAAGATGTTCATATATTAATTACATGCACATTTCTTGTTTGTTTAGAAAACAAACATTTTTGTATCAGTTGAGGTTGCATATTAAAAAGGTATTACACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250579 True 593 lncRNA 0.32 1 5739579 5740171

Neighbor

gene id symbol gene type direction distance location
CI01000051_05712567_05728993 YLPM1 coding upstream 9888 5712567 ~ 5729691 (+)
CI01000051_05657394_05672861 SYT14B, SYT14 coding upstream 65377 5657394 ~ 5674202 (+)
CI01000051_05588671_05593438 RDH14B coding upstream 145602 5588292 ~ 5593977 (+)
CI01000051_05579061_05584087 CRIP2 coding upstream 155492 5579061 ~ 5584087 (+)
CI01000051_05523573_05525861 NA coding upstream 212572 5523362 ~ 5527007 (+)
CI01000051_05757566_05757955 C12ORF57 coding downstream 17395 5757566 ~ 5758141 (+)
CI01000051_05831209_05933202 DLGAP2 coding downstream 91038 5831209 ~ 5933637 (+)
CI01000051_05935542_05939529 NA coding downstream 195272 5935443 ~ 5939632 (+)
CI01000051_05955881_05966250 NA coding downstream 215246 5955417 ~ 5966425 (+)
CI01000051_05969849_05970699 NA coding downstream 229678 5969849 ~ 5971469 (+)
G220922 NA non-coding upstream 62616 5676464 ~ 5676963 (+)
G220889 NA non-coding upstream 167842 5571458 ~ 5571737 (+)
G220861 NA non-coding upstream 216793 5521857 ~ 5522786 (+)
G220856 NA non-coding upstream 240920 5498104 ~ 5498659 (+)
G220850 NA non-coding upstream 249292 5490068 ~ 5490287 (+)
G220916 NA non-coding downstream 887 5741058 ~ 5744465 (+)
G220923 NA non-coding downstream 49357 5789528 ~ 5830106 (+)
G220920 NA non-coding downstream 205419 5945590 ~ 5946344 (+)
G220983 NA non-coding downstream 249635 5989806 ~ 5990114 (+)
G220967 NA non-coding downstream 275002 6015173 ~ 6016182 (+)
G219803 NA other upstream 687546 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 1364249 4372658 ~ 4393677 (+)
G218981 NA other upstream 2492706 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 3673496 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 5014875 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 1085628 6825895 ~ 6830637 (+)
G221319 NA other downstream 1601870 7342041 ~ 7342546 (+)
G221386 NA other downstream 1669352 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 2365472 8209722 ~ 8214696 (+)
G222727 NA other downstream 2602771 8342942 ~ 8343448 (+)

Expression


Co-expression Network