Gene
RNA
| Item | Value |
|---|---|
| gene id | G221742 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 5759113 ~ 5759335 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU251516 | True | 223 | lncRNA | 0.30 | 1 | 5759113 | 5759335 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_05752434_05755144 | NA | coding | downstream | 3969 | 5752290 ~ 5755144 (-) |
| CI01000051_05743847_05749675 | BPNT1 | coding | downstream | 9438 | 5743671 ~ 5749675 (-) |
| CI01000051_05690134_05690418 | NA | coding | downstream | 68695 | 5689547 ~ 5690418 (-) |
| CI01000051_05679116_05685755 | KCNK5B | coding | downstream | 73157 | 5678771 ~ 5685956 (-) |
| CI01000051_05646139_05649781 | 5NT1A, NT5C1BB, NT5C1A | coding | downstream | 109165 | 5645678 ~ 5649948 (-) |
| CI01000051_05949486_05950751 | KCNS3B | coding | upstream | 190008 | 5949343 ~ 5950853 (-) |
| CI01000051_06015846_06019716 | RD3 | coding | upstream | 256372 | 6015707 ~ 6019716 (-) |
| CI01000051_06033224_06041180 | SLC30A1A | coding | upstream | 273707 | 6033042 ~ 6041180 (-) |
| CI01000051_06041891_06047349 | NEK2 | coding | upstream | 282284 | 6041619 ~ 6047710 (-) |
| CI01000051_06052696_06090422 | LPGAT1 | coding | upstream | 291718 | 6051053 ~ 6090422 (-) |
| G221735 | NA | non-coding | downstream | 54946 | 5703909 ~ 5704167 (-) |
| G221717 | NA | non-coding | downstream | 108013 | 5650870 ~ 5651100 (-) |
| G221716 | NA | non-coding | downstream | 115520 | 5643314 ~ 5643593 (-) |
| G221715 | NA | non-coding | downstream | 121268 | 5637590 ~ 5637845 (-) |
| G221714 | NA | non-coding | downstream | 122185 | 5636372 ~ 5636928 (-) |
| G221744 | NA | non-coding | upstream | 3316 | 5762651 ~ 5762972 (-) |
| G221745 | NA | non-coding | upstream | 9036 | 5768371 ~ 5768592 (-) |
| G221780 | NA | non-coding | upstream | 96337 | 5855672 ~ 5909748 (-) |
| G221804 | NA | non-coding | upstream | 189085 | 5948420 ~ 5948656 (-) |
| G221822 | NA | non-coding | upstream | 219406 | 5978741 ~ 5978996 (-) |
| G221575 | NA | other | downstream | 240289 | 5513952 ~ 5518824 (-) |
| G220041 | NA | other | downstream | 1601010 | 4155730 ~ 4158103 (-) |
| CI01000051_02955633_02960400 | SCRN2 | other | downstream | 2797619 | 2955380 ~ 2961148 (-) |
| G218861 | NA | other | downstream | 2918481 | 2840270 ~ 2840632 (-) |
| G218728 | NA | other | downstream | 3212654 | 2527343 ~ 2546459 (-) |
| G221840 | NA | other | upstream | 373438 | 6132773 ~ 6133579 (-) |
| G222729 | NA | other | upstream | 2582814 | 8342149 ~ 8342652 (-) |
| G222730 | NA | other | upstream | 2583635 | 8342970 ~ 8343438 (-) |
