G220983


Basic Information

Item Value
gene id G220983
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5989806 ~ 5990114 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU250649
TGAATCTATTGACAGATAGATACACAAAAAGATTTAAAGCTACAAGATTTTTGCAGTAAAATATCCAAAAACCACTAGGCCATTGTTATATATTTTGTTTAGTTGAGTCTTTACAATATCCCAAATGTTTCCAACTATTTGTAAATCGTGAGAAAATCGTGATTTTAACTAAGAATACAGGATGTGTACGGGAGTCGCCTGTCAATGGCTTCATATCCGCGTTACCCTCGGTTTCCGGTTTTATTTTGTAGAAACCATGGAAACAACAAAGACGCTTTAATATATTACATGTTTTATTAGACAAGTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250649 True 309 lncRNA 0.33 1 5989806 5990114

Neighbor

gene id symbol gene type direction distance location
CI01000051_05969849_05970699 NA coding upstream 18337 5969849 ~ 5971469 (+)
CI01000051_05955881_05966250 NA coding upstream 23381 5955417 ~ 5966425 (+)
CI01000051_05935542_05939529 NA coding upstream 50174 5935443 ~ 5939632 (+)
CI01000051_05831209_05933202 DLGAP2 coding upstream 56169 5831209 ~ 5933637 (+)
CI01000051_05757566_05757955 C12ORF57 coding upstream 231665 5757566 ~ 5758141 (+)
CI01000051_05996289_06007664 RHAG coding downstream 5881 5995995 ~ 6008558 (+)
CI01000051_06113450_06128623 TAGAPB coding downstream 123336 6113450 ~ 6129084 (+)
CI01000051_06136031_06140543 RSPH3 coding downstream 145917 6136031 ~ 6140633 (+)
CI01000051_06155906_06164505 EZRB, RDX, EZR coding downstream 165792 6155906 ~ 6164505 (+)
CI01000051_06167413_06171890 NA coding downstream 177089 6167203 ~ 6172507 (+)
G220920 NA non-coding upstream 43462 5945590 ~ 5946344 (+)
G220923 NA non-coding upstream 159700 5789528 ~ 5830106 (+)
G220916 NA non-coding upstream 245341 5741058 ~ 5744465 (+)
G220930 NA non-coding upstream 249635 5739579 ~ 5740171 (+)
G220922 NA non-coding upstream 312843 5676464 ~ 5676963 (+)
G220967 NA non-coding downstream 25059 6015173 ~ 6016182 (+)
G220991 NA non-coding downstream 29207 6019321 ~ 6019978 (+)
G220993 NA non-coding downstream 30789 6020903 ~ 6021164 (+)
G220992 NA non-coding downstream 32833 6022947 ~ 6023186 (+)
G220995 NA non-coding downstream 33785 6023899 ~ 6024130 (+)
G219803 NA other upstream 937773 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 1614476 4372658 ~ 4393677 (+)
G218981 NA other upstream 2742933 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 3923723 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 5265102 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 835685 6825895 ~ 6830637 (+)
G221319 NA other downstream 1351927 7342041 ~ 7342546 (+)
G221386 NA other downstream 1419409 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 2115529 8209722 ~ 8214696 (+)
G222727 NA other downstream 2352828 8342942 ~ 8343448 (+)

Expression


Co-expression Network