G220992


Basic Information

Item Value
gene id G220992
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 6022947 ~ 6023186 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU250662
GTTTGTCATCTCAAAACGTTAGTCTTGTGTATTTCTTCCTCTTTGTCCATCCACCCACTCCTCTGCCATTCTCTTTTGTTATCTCCTCTTTATTCATTTCTCATTTGCTCGTTCTCCTTACCTTAATGAGTGATCCAGTTGTCTTGTAGGGCTTGTAGTTGTGCAACGGCCCAGGTCACATTTCCTCTTTGAGATTGCTCTGAAGTGCCTTTCTGTTTTCGGTTGCTATAGCGATGCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250662 True 240 lncRNA 0.43 1 6022947 6023186

Neighbor

gene id symbol gene type direction distance location
CI01000051_05996289_06007664 RHAG coding upstream 14389 5995995 ~ 6008558 (+)
CI01000051_05969849_05970699 NA coding upstream 51478 5969849 ~ 5971469 (+)
CI01000051_05955881_05966250 NA coding upstream 56522 5955417 ~ 5966425 (+)
CI01000051_05935542_05939529 NA coding upstream 83315 5935443 ~ 5939632 (+)
CI01000051_05831209_05933202 DLGAP2 coding upstream 89310 5831209 ~ 5933637 (+)
CI01000051_06113450_06128623 TAGAPB coding downstream 90264 6113450 ~ 6129084 (+)
CI01000051_06136031_06140543 RSPH3 coding downstream 112845 6136031 ~ 6140633 (+)
CI01000051_06155906_06164505 EZRB, RDX, EZR coding downstream 132720 6155906 ~ 6164505 (+)
CI01000051_06167413_06171890 NA coding downstream 144017 6167203 ~ 6172507 (+)
CI01000051_06286985_06304439 KCNK3A, KCNK3 coding downstream 263799 6286985 ~ 6304439 (+)
G220993 NA non-coding upstream 1783 6020903 ~ 6021164 (+)
G220991 NA non-coding upstream 2969 6019321 ~ 6019978 (+)
G220967 NA non-coding upstream 6765 6015173 ~ 6016182 (+)
G220983 NA non-coding upstream 32833 5989806 ~ 5990114 (+)
G220920 NA non-coding upstream 76603 5945590 ~ 5946344 (+)
G220995 NA non-coding downstream 713 6023899 ~ 6024130 (+)
G220996 NA non-coding downstream 2547 6025733 ~ 6025954 (+)
G220998 NA non-coding downstream 3429 6026615 ~ 6026902 (+)
G220966 NA non-coding downstream 65313 6088499 ~ 6090361 (+)
G221001 NA non-coding downstream 69285 6092471 ~ 6092694 (+)
G219803 NA other upstream 970914 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 1647617 4372658 ~ 4393677 (+)
G218981 NA other upstream 2776074 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 3956864 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 5298243 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 802613 6825895 ~ 6830637 (+)
G221319 NA other downstream 1318855 7342041 ~ 7342546 (+)
G221386 NA other downstream 1386337 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 2082457 8209722 ~ 8214696 (+)
G222727 NA other downstream 2319756 8342942 ~ 8343448 (+)

Expression


Co-expression Network