G221058


Basic Information

Item Value
gene id G221058
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 6311335 ~ 6311806 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU250734
GACGTGATCCGAGCTAAGTGATCATTATATTTAATCACCATTGGCAGCGCGATTTACTGTGTTTTTTTTTTTTTTTTTTTTTCCTCAGTAAAAACAAAAGTGGCAGACATGTTACTTGTTCAGATGACATTTTCCGTTGAAAATTCTTATTTTGGTCATACTTCCAAGACTACAATCTGTGATTCCAAAGTACAGTATCCACACTGGTGTAGTGATTGACAGCAAACATTAGATTCATCTGCGCTGAGGAGCTGCGCCAATGCACAATGCACGTACAGATAATAATTCTGCAAACAACTGCAATTGCAGGTTTCAAACAGAGATGGCGACAAAGAGGCAAAACTACAGACTGCAGCTTTAAGTAAATAAGAACAATGAGAAAAAATGGCAAACAGGCTGAATGAAAATGCACTTTCACTTTCTGACAGTAGGGGGCACTTATGGAAATCCAGAAATACAGCTGTGCACAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250734 True 472 lncRNA 0.38 1 6311335 6311806

Neighbor

gene id symbol gene type direction distance location
CI01000051_06286985_06304439 KCNK3A, KCNK3 coding upstream 6896 6286985 ~ 6304439 (+)
CI01000051_06167413_06171890 NA coding upstream 138828 6167203 ~ 6172507 (+)
CI01000051_06155906_06164505 EZRB, RDX, EZR coding upstream 146830 6155906 ~ 6164505 (+)
CI01000051_06136031_06140543 RSPH3 coding upstream 170702 6136031 ~ 6140633 (+)
CI01000051_06113450_06128623 TAGAPB coding upstream 182251 6113450 ~ 6129084 (+)
CI01000051_06315270_06317555 NA coding downstream 3464 6315270 ~ 6318626 (+)
CI01000051_06373457_06388474 INTS7 coding downstream 61651 6373457 ~ 6388597 (+)
CI01000051_06398882_06401885 NA coding downstream 87076 6398882 ~ 6402536 (+)
CI01000051_06655818_06730954 NA coding downstream 344012 6655818 ~ 6731285 (+)
CI01000051_06825895_06830637 NA coding downstream 514089 6825895 ~ 6830637 (+)
G221057 NA non-coding upstream 133 6310952 ~ 6311202 (+)
G221013 NA non-coding upstream 110086 6200333 ~ 6201249 (+)
G221014 NA non-coding upstream 111402 6199428 ~ 6199933 (+)
G221027 NA non-coding upstream 115686 6195439 ~ 6195649 (+)
G221026 NA non-coding upstream 116173 6194848 ~ 6195162 (+)
G221062 NA non-coding downstream 4164 6315970 ~ 6316188 (+)
G221065 NA non-coding downstream 18171 6329977 ~ 6332489 (+)
G221194 NA non-coding downstream 473680 6785486 ~ 6793936 (+)
G221188 NA non-coding downstream 483185 6794991 ~ 6796606 (+)
G219803 NA other upstream 1259302 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 1936005 4372658 ~ 4393677 (+)
G218981 NA other upstream 3064462 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 4245252 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 5586631 637590 ~ 720669 (+)
G221319 NA other downstream 1030235 7342041 ~ 7342546 (+)
G221386 NA other downstream 1097717 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 1793837 8209722 ~ 8214696 (+)
G222727 NA other downstream 2031136 8342942 ~ 8343448 (+)

Expression


Co-expression Network