G221062


Basic Information

Item Value
gene id G221062
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 6315970 ~ 6316188 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU250738
CGAGAGTCCATGGACAGGTATATTCAAGAATCTCTCAATTCCAGACTCATCTGCCCCTCTTTCTCACCCGCTGGGGTGGGGTTCTTTGTTGAGAAGAAGGACAGCTCCCTGCTCCCCTGCATTGACTACAGGGGATTAAACGACATCACAGTTAAAAACAGGTACCCCCTACCTCTCATGTCGTCTGCTTTTGAGTTATTGCAGAGAGCCCAGGTCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250738 True 219 lncRNA 0.50 1 6315970 6316188

Neighbor

gene id symbol gene type direction distance location
CI01000051_06286985_06304439 KCNK3A, KCNK3 coding upstream 11531 6286985 ~ 6304439 (+)
CI01000051_06167413_06171890 NA coding upstream 143463 6167203 ~ 6172507 (+)
CI01000051_06155906_06164505 EZRB, RDX, EZR coding upstream 151465 6155906 ~ 6164505 (+)
CI01000051_06136031_06140543 RSPH3 coding upstream 175337 6136031 ~ 6140633 (+)
CI01000051_06113450_06128623 TAGAPB coding upstream 186886 6113450 ~ 6129084 (+)
CI01000051_06373457_06388474 INTS7 coding downstream 57269 6373457 ~ 6388597 (+)
CI01000051_06398882_06401885 NA coding downstream 82694 6398882 ~ 6402536 (+)
CI01000051_06655818_06730954 NA coding downstream 339630 6655818 ~ 6731285 (+)
CI01000051_06825895_06830637 NA coding downstream 509707 6825895 ~ 6830637 (+)
CI01000051_06887510_06888144 NA coding downstream 570970 6887158 ~ 6888179 (+)
G221058 NA non-coding upstream 4164 6311335 ~ 6311806 (+)
G221057 NA non-coding upstream 4768 6310952 ~ 6311202 (+)
G221013 NA non-coding upstream 114721 6200333 ~ 6201249 (+)
G221014 NA non-coding upstream 116037 6199428 ~ 6199933 (+)
G221027 NA non-coding upstream 120321 6195439 ~ 6195649 (+)
G221065 NA non-coding downstream 13789 6329977 ~ 6332489 (+)
G221194 NA non-coding downstream 469298 6785486 ~ 6793936 (+)
G221188 NA non-coding downstream 478803 6794991 ~ 6796606 (+)
G221208 NA non-coding downstream 531453 6847641 ~ 6911711 (+)
G219803 NA other upstream 1263937 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 1940640 4372658 ~ 4393677 (+)
G218981 NA other upstream 3069097 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 4249887 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 5591266 637590 ~ 720669 (+)
G221319 NA other downstream 1025853 7342041 ~ 7342546 (+)
G221386 NA other downstream 1093335 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 1789455 8209722 ~ 8214696 (+)
G222727 NA other downstream 2026754 8342942 ~ 8343448 (+)

Expression


Co-expression Network