XLOC_009738 (si:dkey-11o1.6)


Basic Information

Item Value
gene id XLOC_009738
gene name si:dkey-11o1.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 11585576 ~ 11593545 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019491
GACGATTTGAGCTGCAGCTCCATGCAGATCAGAGCTCGATCACGATCATGATGGTTTTTCGTGGATTATACTGGACTCTGTGGATGTTCTCATGTATTGAAAATATACATAATAGGCTTATTGTTCCAGAGCAATCATTAACAGAGGATGAGTCATCTGTTAACACCATCTCTTTACCACATGCTGTACAAGTTCAAGGTAAAGATCATCAGTGGCCTGAGCTGATTAATGGAGCAGTAGGAGGAAGCGTAAAGTTCACCCCTAATAATCCACCATCAACTGCGATTGATATAATCAACTGGCAATTTGGAACAACTATTATATTGACTGGAAATCCTGATTCACCATTTGTTGCCTCAGCATATAGAGACAgagtcagttttgacaaaaacaCTCTCGCTCTGGAGCTGCGGAACCTAAAACTAGAGGATTCTGGATCATACAGTCTGACTGTGGTCCCTAGTAGTGGAGATCAAGTTAGAGGAGAAACTGCACTACAGGTGTTTGaaaaaataaataataggctTATTGTTCCAGAGCAATCATTAGCAGAGGATGAGTCATCTGTTAACACCATCTCTTTACCACATCCTGTACAAGTTCAAGGACAAAATGTAGATCGAGATCTTCAGATTCCTGAGCTGACTAATGAAGTAGTAGGAGGAAGCGTGAAGTTCATCCCTAATAACCCACCATCAACAGCAATTAAAGTAGTTCAATGGAAATTTGGAACAACTGGTATACTGACAGGACCACCTGATTCACCGTTAATAGTCTCAACATACAGAAACAGAATCAGTTTTGACAAAAACACTCTCTC

Function

symbol description
si:dkey-11o1.6 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105461

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019491 True 820 mRNA 0.40 5 11585576 11593545

Neighbor

gene id symbol gene type direction distance location
XLOC_009737 NA coding upstream 1698 11580652 ~ 11583878 (+)
XLOC_009736 NA coding upstream 7169 11573189 ~ 11578407 (+)
XLOC_009735 zgc:198329 coding upstream 15847 11558868 ~ 11569729 (+)
XLOC_009734 grik5 coding upstream 29642 11483811 ~ 11555934 (+)
XLOC_009733 NA coding upstream 208731 11361760 ~ 11376845 (+)
XLOC_009739 si:dkey-11o1.7 coding downstream 3841 11597386 ~ 11598447 (+)
XLOC_009740 si:dkey-11o1.3 coding downstream 9551 11603096 ~ 11621551 (+)
XLOC_009741 cxcr3.1 coding downstream 30411 11623956 ~ 11642009 (+)
XLOC_009742 si:dkey-250k15.9 coding downstream 59046 11652591 ~ 11653478 (+)
XLOC_009743 si:dkey-250k15.10 coding downstream 67294 11660839 ~ 11680970 (+)
XLOC_009724 NA non-coding upstream 967890 10617354 ~ 10617686 (+)
XLOC_009719 CU929328.1 non-coding upstream 1195789 10387719 ~ 10389787 (+)
XLOC_009751 NA non-coding downstream 524086 12117631 ~ 12139336 (+)
XLOC_009755 CR388102.1 non-coding downstream 706624 12300169 ~ 12300286 (+)
XLOC_009756 CR388102.6 non-coding downstream 787185 12380730 ~ 12380846 (+)
XLOC_009764 NA non-coding downstream 1369415 12962960 ~ 12963877 (+)
XLOC_009765 NA non-coding downstream 1518719 13112264 ~ 13115609 (+)

Expression


Co-expression Network