G222295


Basic Information

Item Value
gene id G222295
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7162053 ~ 7172871 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU252120
CAGATTCCTCTGGCAGGCGTCAGTCGTTTTTCCTCCTCCTCTCCTGGCGTGACCTGGATCCCAACCTCCACAGGTCCAGACCTCCGGCAGACTTCCACCCGTGGGGGTCTGGGGGACGGGGAGCCACCGCAGTCGTTTGGTTTGTCGAAACAGACGCTGGGTCCGGGGCACAGTCTCCTCTTGTGCTCGATAAACACTAGAATATCTCCCAGGGGGAAGTTGGTTTGACATTGACCGCAGGTCAGCAGGTCACTCTCTCCGGCTCCGCCCACAGGGCTGGCTATGGAGCCCTCCGATGGGCACTGTTCCACCCCTGCGTCATGATCTGGCCCAGTCGGTAGATTCTCCCTCTGTGTGAGGGACAGATGCTGTGGGTTGCCTTGCTTCCGTCGGGACATCGCCCCGCATTTACAGCAGCATCTCACGGACACTCGGACTAATGTGCGCGCTCCCGAAGCTCTCCAAACTTTCCTCTACAGTCCAGGTACTGTTCCACTGCGCTCGCGGGCTATTCTAGTCGTTATCGCGGCACAAACTAACACTTGTACTCTCTGAACAGACTAAATTGTGCTCGACTTTTGTGAAGCAGTGACTAAGTGCCACTTAACCTGAGACAGCGATGCGAGAAAATCACTCCGACTCGCAGCAGCTCATTTAACCTCTGACAACATCGATTCCAAAACACTGTCTTTAAATTCAGGTATTCTTTCTTTAAAAAGTCCTAAAACAGTTGTTGTCCAGTTATAATGGAAATCCAAGATCCGTGGACGGCGGGCTCGCCAGGTGAGCGAAGTCTTTGGCACAGTCCTCCATGTGCGCTT
>TU252111
AAACTGAGTCTTTAACCCTCGGAATAAGGAATCTTCTTCATTAATCCGCACACTATGTCTCTTAGCACTTGAATTTTAATGGGCTTTCTTAGCCTTTTTTTCTTAATACGATGATATTTCCCCCAAACACGTCGGCCCTCAGTATAAAACACCTACCTGTTGGGACGCCCTCCTGCTTGGGGCAGATTCCTCTGGCAGGCGTCAGTCGTTTTTCCTCCTCCTCTCCTGGCGTGACCTGGATCCCAACCTCCACAGGTCCAGACCTCCGGCAGACTTCCACCCGTGGGGGTCTGGGGGACGGGGAGCCACCGCAGTCGTTTGGTTTGTCGAAACAGACGCTGGGTCCGGGGCACAGTCTCCTCTTGTGCTCGATAAACACTAGAATATCTCCCAGGGGGAAGTTGGTTTGACATTGACCGCAGGTCAGCAGGTCACTCTCTCCGGCTCCGCCCACAGGGCTGGCTATGGAGCCCTCCGATGGGCACTGTTCCACCCCTGCGTCATGATCTGGCCCAGCTGAGGCGTGAAAGACGAGGGGGAAAAATATCAGTCAGTGCACGACTCTTTTTAGGCACATTATGTTTAATAATAATAATAAATGGCTTATAATAATCAATTTTGAGATGTAAACAGATCAATTTGATAGCTGCAAGTAGCTGAAAAGAAAAGTCTGCCGATGTGTTTCTGTCTTTTTGTATAAATTTAAATATTGTTTTCTTTGGCTATTTCTCTTTTTTCATATATAATGATATATTTCATATATCATTGATCAAATCCATAAGGGTCTAAGTTAATGTTCTGCTCATCTGAATCTTACAGGATTTAAATCGAGTTTTAAATTTAGGCCTCAAGTCAATACCAAATATTTTTCACTATTCACCAATGGCTGTAATTTGTAATTTGCAAAATGTGCTGCTAGCTATAGTACATGTGTGACTAACTACAACAGTGTGAACAACATTCCAGGTTTGGCAAGTGCAGGTTAACAATTTGATTTCCAAAAGATGTCAGAAGTTCCCCAACTGCAACCACATTCAAGGCCGGACTGAAAACATCTGTTTGCATTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252120 False 821 lncRNA 0.54 2 7162053 7171077
TU252111 True 1068 lncRNA 0.44 2 7170192 7172871
Loading

Neighbor

gene id symbol gene type direction distance location
CI01000051_06966165_06969998 NA coding downstream 191836 6966093 ~ 6970217 (-)
CI01000051_06958650_06963551 CLEC11A coding downstream 198232 6958572 ~ 6963821 (-)
CI01000051_06910132_06916487 NA coding downstream 245566 6909440 ~ 6916487 (-)
CI01000051_06884323_06886377 EXOC8 coding downstream 275414 6884008 ~ 6886639 (-)
CI01000051_06837978_06881158 TRIM67 coding downstream 280347 6837414 ~ 6881706 (-)
CI01000051_07218226_07226180 CHRNA4B coding upstream 45271 7218142 ~ 7226726 (-)
CI01000051_07288569_07296096 ELOVL1B coding upstream 115214 7288085 ~ 7296096 (-)
CI01000051_07403086_07404051 NA coding upstream 229196 7402067 ~ 7404784 (-)
CI01000051_07410144_07439528 MAST3, MAST3B coding upstream 236592 7409463 ~ 7439528 (-)
CI01000051_07580256_07582183 NA coding upstream 407370 7580241 ~ 7582183 (-)
G222243 NA non-coding downstream 49156 7111614 ~ 7112897 (-)
G222195 NA non-coding downstream 110376 7016959 ~ 7051677 (-)
G222194 NA non-coding downstream 147742 7014105 ~ 7014311 (-)
G222190 NA non-coding downstream 150740 7011033 ~ 7011313 (-)
G222173 NA non-coding downstream 167057 6973082 ~ 6994996 (-)
G222353 NA non-coding upstream 121436 7294307 ~ 7295633 (-)
G222355 NA non-coding upstream 159427 7332298 ~ 7332515 (-)
G222356 NA non-coding upstream 169237 7342108 ~ 7342528 (-)
G222361 NA non-coding upstream 183232 7356103 ~ 7356312 (-)
G222363 NA non-coding upstream 184278 7357149 ~ 7357385 (-)
G221840 NA other downstream 1028474 6132773 ~ 6133579 (-)
G221575 NA other downstream 1643229 5513952 ~ 5518824 (-)
G220041 NA other downstream 3003950 4155730 ~ 4158103 (-)
CI01000051_02955633_02960400 SCRN2 other downstream 4200559 2955380 ~ 2961148 (-)
G218861 NA other downstream 4321421 2840270 ~ 2840632 (-)
G222729 NA other upstream 1169278 8342149 ~ 8342652 (-)
G222730 NA other upstream 1170099 8342970 ~ 8343438 (-)

Expression

G222295 Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

G222295 Expression in each Bioproject

Bar chart with 38 bars.
G222295 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network