G221393


Basic Information

Item Value
gene id G221393
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7375973 ~ 7376205 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU251115
CATCACACTGCCTTCGCCGGCTTGCCTTCTTCCCATAGTGCATCCTGGTGCCATGTGTTCCCCAGGTAAGCGACGCACATGCACCCAAACTGTTCCAGTTCTGATTCTCACGTGCCCACTGTTGGTGCTTTCAGCGATGGACAGGGGTCAGCATGGGCACCCTGACTGGTCTGCGGCTATGCAGCTCCATATGCAACAAACTGAGATACACTGTCTATTCTGACACCTTTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251115 True 233 lncRNA 0.54 1 7375973 7376205

Neighbor

gene id symbol gene type direction distance location
CI01000051_07367270_07370738 ATP5B coding upstream 5095 7366852 ~ 7370878 (+)
CI01000051_07345863_07353841 MKNK1 coding upstream 20853 7345863 ~ 7355120 (+)
CI01000051_07337005_07340657 MOB3C, MOB3C.S, MOBKL2C coding upstream 35281 7336853 ~ 7340692 (+)
CI01000051_07287140_07287867 NA coding upstream 87938 7287140 ~ 7288035 (+)
CI01000051_07267084_07283654 ZFYVE9B coding upstream 91958 7267011 ~ 7284015 (+)
CI01000051_07378590_07389158 ABCB11B, ABCB11 coding downstream 2385 7378590 ~ 7389570 (+)
CI01000051_07391277_07399712 ABCB11B, ABCB11 coding downstream 14429 7390634 ~ 7399786 (+)
CI01000051_07470914_07489207 LRP1AB, LRP1 coding downstream 94709 7470914 ~ 7489242 (+)
CI01000051_07507549_07530087 HOMER3 coding downstream 131344 7507549 ~ 7530087 (+)
CI01000051_07534938_07540104 NA coding downstream 156434 7532639 ~ 7540418 (+)
G221385 NA non-coding upstream 2239 7373383 ~ 7373734 (+)
G221378 NA non-coding upstream 44105 7331657 ~ 7331868 (+)
G221311 NA non-coding upstream 82220 7292239 ~ 7293753 (+)
G221347 NA non-coding upstream 89318 7286387 ~ 7286655 (+)
G221365 NA non-coding upstream 90204 7285496 ~ 7285769 (+)
G221386 NA non-coding downstream 24970 7401175 ~ 7413007 (+)
G221336 NA non-coding downstream 46718 7422923 ~ 7425419 (+)
G221406 NA non-coding downstream 74274 7450479 ~ 7450890 (+)
G221408 NA non-coding downstream 75535 7451740 ~ 7452011 (+)
G221409 NA non-coding downstream 79126 7455331 ~ 7455537 (+)
G221319 NA other upstream 33427 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 542905 6825895 ~ 6830637 (+)
G219803 NA other upstream 2323940 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 3000643 4372658 ~ 4393677 (+)
G218981 NA other upstream 4129100 3245443 ~ 3246873 (+)
CI01000051_08211233_08214513 NA other downstream 729438 8209722 ~ 8214696 (+)
G222727 NA other downstream 966737 8342942 ~ 8343448 (+)

Expression


Co-expression Network