G221538


Basic Information

Item Value
gene id G221538
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 8008915 ~ 8009351 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU251276
GTTTTGCGTCTGCCGATACTGAAATGAATATGCATACCTGCTTACCTTTTTGTTTTCGACTTGGTTAAATAATCACATTCTTCATGGTATCGTTTGCAGGGAAGAGAAGATATTTTATCCCATTGCATGATCATTTGGTGTTTTCACTTCAGTTTTGTAGAATTCCGTTTACAATGTTGATCTGGTTACCGTGAAAACAGTGTCACGCGCTGGGCACGTGCTGCTTTTCTTTGTTGGAAGGGTGTAAATGTAACTGTAGTTTTAATGTTTTCTTTGTAAATATTCACTTTCCCATATAGCCACGGAGGAGAATCGGATGGGCATTCAGCGGACAGACACCCTTTTTTACAGTCTATGACAGACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251276 True 365 lncRNA 0.40 2 8008915 8009351

Neighbor

gene id symbol gene type direction distance location
CI01000051_07978982_07979269 NA coding upstream 29612 7978390 ~ 7979303 (+)
CI01000051_07963621_07976671 PTBP1B, PTBP1 coding upstream 30706 7963621 ~ 7978209 (+)
CI01000051_07954270_07957397 NA coding upstream 51356 7954270 ~ 7957559 (+)
CI01000051_07946087_07950464 NA coding upstream 57434 7946016 ~ 7951481 (+)
CI01000051_07938052_07941645 MISP coding upstream 66804 7937692 ~ 7942111 (+)
CI01000051_08046197_08069874 NA coding downstream 36544 8045895 ~ 8069917 (+)
CI01000051_08171018_08172280 EFNA2 coding downstream 161667 8171018 ~ 8172544 (+)
CI01000051_08211233_08214513 NA coding downstream 200371 8209722 ~ 8214696 (+)
CI01000051_08381644_08388611 NA coding downstream 372240 8381591 ~ 8389116 (+)
CI01000051_08425890_08429863 NA coding downstream 415346 8424697 ~ 8429965 (+)
G221530 NA non-coding upstream 12618 7996022 ~ 7996297 (+)
CI01000051_07806350_07831779 GRIN3B non-coding upstream 141887 7806350 ~ 7832334 (+)
G221333 NA non-coding upstream 168141 7804351 ~ 7840774 (+)
G221409 NA non-coding upstream 553378 7455331 ~ 7455537 (+)
G221408 NA non-coding upstream 556904 7451740 ~ 7452011 (+)
G221539 NA non-coding downstream 6893 8016244 ~ 8016535 (+)
G221552 NA non-coding downstream 32266 8041617 ~ 8041854 (+)
G222631 NA non-coding downstream 214599 8223950 ~ 8224280 (+)
G222642 NA non-coding downstream 223315 8232666 ~ 8232884 (+)
G222645 NA non-coding downstream 224119 8233470 ~ 8234002 (+)
G221386 NA other upstream 595908 7401175 ~ 7413007 (+)
G221319 NA other upstream 666369 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 1175847 6825895 ~ 6830637 (+)
G219803 NA other upstream 2956882 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 3633585 4372658 ~ 4393677 (+)
G222727 NA other downstream 333591 8342942 ~ 8343448 (+)

Expression


Co-expression Network