G221539


Basic Information

Item Value
gene id G221539
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 8016244 ~ 8016535 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU251277
CTACAGGTACATTGTCGAAAACGGCAGTAATGCAGCGCGATTTGTATGGAGTTAATATTTTGCCATAATTAAACAAACAAATCCAGCATTTTGCAAACAAACACGATCTGCTTTGCAAAGGAAGACTCGACTCGCAAACAAACAGAAAGTGATGTGCAAATACAAAGGTCAGTTTGAGCGAAAACGCAGAGGAGTAACAAATATATGTATTGTGTTAGGGTTAGGGTATTATCCAAAACAGCAGATGGCGCTTTGCTATGGGTCAATTTACGCTAGTCTCACGAGAGAAGCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584613

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251277 True 292 lncRNA 0.40 1 8016244 8016535

Neighbor

gene id symbol gene type direction distance location
CI01000051_07978982_07979269 NA coding upstream 36941 7978390 ~ 7979303 (+)
CI01000051_07963621_07976671 PTBP1B, PTBP1 coding upstream 38035 7963621 ~ 7978209 (+)
CI01000051_07954270_07957397 NA coding upstream 58685 7954270 ~ 7957559 (+)
CI01000051_07946087_07950464 NA coding upstream 64763 7946016 ~ 7951481 (+)
CI01000051_07938052_07941645 MISP coding upstream 74133 7937692 ~ 7942111 (+)
CI01000051_08046197_08069874 NA coding downstream 29360 8045895 ~ 8069917 (+)
CI01000051_08171018_08172280 EFNA2 coding downstream 154483 8171018 ~ 8172544 (+)
CI01000051_08211233_08214513 NA coding downstream 193187 8209722 ~ 8214696 (+)
CI01000051_08381644_08388611 NA coding downstream 365056 8381591 ~ 8389116 (+)
CI01000051_08425890_08429863 NA coding downstream 408162 8424697 ~ 8429965 (+)
G221538 NA non-coding upstream 6893 8008915 ~ 8009351 (+)
G221530 NA non-coding upstream 19947 7996022 ~ 7996297 (+)
CI01000051_07806350_07831779 GRIN3B non-coding upstream 149216 7806350 ~ 7832334 (+)
G221333 NA non-coding upstream 175470 7804351 ~ 7840774 (+)
G221409 NA non-coding upstream 560707 7455331 ~ 7455537 (+)
G221552 NA non-coding downstream 25082 8041617 ~ 8041854 (+)
G222631 NA non-coding downstream 207415 8223950 ~ 8224280 (+)
G222642 NA non-coding downstream 216131 8232666 ~ 8232884 (+)
G222645 NA non-coding downstream 216935 8233470 ~ 8234002 (+)
G222653 NA non-coding downstream 226829 8243364 ~ 8243605 (+)
G221386 NA other upstream 603237 7401175 ~ 7413007 (+)
G221319 NA other upstream 673698 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 1183176 6825895 ~ 6830637 (+)
G219803 NA other upstream 2964211 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 3640914 4372658 ~ 4393677 (+)
G222727 NA other downstream 326407 8342942 ~ 8343448 (+)

Expression


Co-expression Network