XLOC_009742 (si:dkey-250k15.9)


Basic Information

Item Value
gene id XLOC_009742
gene name si:dkey-250k15.9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 11652591 ~ 11653478 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019495
AAAACATAACAAATGTGAGGCTTACTGGTCCAGAAGAAACCTTAATCGAGGATGAATCATTTGCCAACATCACCTCTGAGGGAAGCGGCACCATAACCTCTGTGCAGTGGATGAAGGATAACAGTCCTCTGTCTTCTAGCAGCAGAATCATCTTCTCATCTGATAACAGATCAGTGTCCATCAGTGCAGTGCAGAGATCAGACACTGGAGAATATCAGTGTACATACAGTAACCCTGTCAGCTCTGAGACAGCAAAACTCACCCTGATCATCAACTATGGGCCAGAAGGTGTTTCTATTAAGGGTCCAGATGAGATGAATTTAGGTGTTCAAGtgtttttgtcttgctttgcAAATTCTGAACCTTCTGCTTCATTCAGCTGGACATTTAATGGGTCAGACACTGGTGTGACCACAGACAAATACACCATTGATAAGACCGATCTCACAGACAGTGGAGAATACATCTGTACAGCCTATAATAGAGTCACAAACAGAAGTGAATCAATAAGACATGTTTTACGCATTCAAGTTGGAGGTGGAGGGCTGTCAACCGGAGCGGTAGTTGGGATTGCCATTGGTGTTTCAGTGGCAGTTTCAGGAATTTGTGGTCTGATTGTctattttacaaaaaacaacatAAT

Function

symbol description
si:dkey-250k15.9 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095134

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019495 True 643 mRNA 0.43 3 11652591 11653478

Neighbor

gene id symbol gene type direction distance location
XLOC_009741 cxcr3.1 coding upstream 10582 11623956 ~ 11642009 (+)
XLOC_009740 si:dkey-11o1.3 coding upstream 31040 11603096 ~ 11621551 (+)
XLOC_009739 si:dkey-11o1.7 coding upstream 54144 11597386 ~ 11598447 (+)
XLOC_009738 si:dkey-11o1.6 coding upstream 59046 11585576 ~ 11593545 (+)
XLOC_009737 NA coding upstream 68713 11580652 ~ 11583878 (+)
XLOC_009743 si:dkey-250k15.10 coding downstream 7361 11660839 ~ 11680970 (+)
XLOC_009744 si:dkey-250k15.7 coding downstream 30070 11683548 ~ 11709759 (+)
XLOC_009745 ceacam1 coding downstream 70752 11724230 ~ 11760596 (+)
XLOC_009746 si:dkey-250k15.4 coding downstream 126056 11779534 ~ 11785286 (+)
XLOC_009747 cxcr3.2 coding downstream 164648 11818126 ~ 11825303 (+)
XLOC_009736 NA non-coding upstream 74184 11573189 ~ 11578407 (+)
XLOC_009733 NA non-coding upstream 275746 11361760 ~ 11376845 (+)
XLOC_009724 NA non-coding upstream 1034905 10617354 ~ 10617686 (+)
XLOC_009719 CU929328.1 non-coding upstream 1262804 10387719 ~ 10389787 (+)
XLOC_009751 NA non-coding downstream 464153 12117631 ~ 12139336 (+)
XLOC_009755 CR388102.1 non-coding downstream 646691 12300169 ~ 12300286 (+)
XLOC_009756 CR388102.6 non-coding downstream 727252 12380730 ~ 12380846 (+)
XLOC_009764 NA non-coding downstream 1309482 12962960 ~ 12963877 (+)
XLOC_009765 NA non-coding downstream 1458786 13112264 ~ 13115609 (+)

Expression


Co-expression Network