XLOC_009745 (ceacam1)


Basic Information

Item Value
gene id XLOC_009745
gene name ceacam1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 11724230 ~ 11760596 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019502
ACTGGAGAACCTTGTCATTGGTATAGCAAGGTAAATATTAGCAGTATGAAAGTATAGCGATGATTAGTTTCGGACACGTCTGAGGTCTGAGGAAGAAGTCAGGGATACTCTAGTTAGGATTTCCAAAATGGGATTTAAAGTTCTTGCCTTCTTCGTCTTATTCTGTGCACCAgGTCTTTGTCAAGTGAATGTGGTTCCATCAAATAACCCAGTGGCAGTCGGGAGCAATGTCACCCTAAATGTGAATTCGTCCATGCCCATTACAGTTGGGCTCTGGTTGTTTGGGCCTAGTACATTGTTCATGTGGTACATGGGGGACATTATTCCGGGTAATAGCCTCCAACCGGGAGTATATTTTAACAGCTCTACATATCAGCTCACCTTATCGGCAGTAACCCTGGAGAGTTCTGGCGTGTATGTGCTGGATGTATATAAACCCAACCGGATCAGATCAGAGATTACGTTGGAAGTTCAGGAACCCGTCGGTAACGTAAATACAACTGTAAACACAACAAACCTGGTGGAGGTGAACGACACCGTGTACTTCACCTGCTCGGTTACAACTTCGCCGGTGTGGTTTTCGTGGCTGAACGGCAGCTCTGCAGTCAAAGATGGCGGGAGAGTTCAGCTCCAAAACAGTGGACAAACTCTTATAATCAACGGAGTGACTCGGTACGATGAAGGACCATTCAAGTGTGTTGTGGTAAACAACATCAGCAGCCAGCAGAGTGTTGAAATGAAACTCAATATAAGCTatGGGCCTGGAAACCTGACACTTACTGCCATGCCAGAGAAAACAGTATACATTTCTGGTTCAAACTTTTCTCTGTCATGCTCTGCTGACTCCAAACCGACAGCTACTTTCAACTGGATGTTGAATGGCAATCTTCTGAATGTCAATGGTCCGGTTTACGTATTTACAAAGGCTACTCAAAACCAGTCGGGAGTGTACACCTGTGGTGCCCAAAACGCAGCAACACTCAGATATGCTGCAGTGACAAAAACTATTCGTATAGTTGatccAATATCAGAAGTGGTAGTGAATTCAACAAGCTTCCCAGTTGAAAACGTACCTTTTAATCTAAGATGTAATGTTGTGGGACCAGTGGACTCCATTCAGTGGATGAAGGACGGAGTGTACCTGTATACTGACAACACAACCACGCTCTCTAGTGACAACTCAACCTTGAGCTTTAAACAACTCGCTCTTAGCGATGACGGACTGTACCAGTGCACAGCTAGTAATGCAGTGGGCGACATGACCCAGGCCTATAACCTGACTGTCAACTatGGCCCAATCAACACAGCGGTCTCCGGTCCATTTGTAGCAGCAGTGGGAGATAGTGTGACCTTCAGCTGTTCCTCTAACTCTCGTCCTCAAAGTCAGTACAGCTGGTATTTTAATGGCTTTAATGTGTTCAACGGCCCGGTGTACGTAACTGCAGCTCTCCTACAAAACCAAAGTGGACTGTACACCTGCATGGCCTTTAATAGTATCACAGGCAAAACCAACAACAATTCAATGACATTAACCGTCCTTGTTCCTGTGAGCAATGTTGTGGTGAATATTAGCGATGGACAGCAACCAATCTTCAGTAACCCATTCACATTAACCTGCACGGCCAGTGGAAATGTTGATTACATTCAGTGGATGTTGAACGGCGCAGTCCTTTATCCTCAAGATGGAATCACTTTCTCTGGTGACAACTCAACCTTGAGCTTCAATAATCTCACTTTCAGTGATAATGGAAATTATCAGTGTGAAGCAAGTAATGATATCAGCAATATGACCAGCACAGCCTATGACTTGATGGTCAACTATGGTCCATGGAACGTAACACTTAATGGCCCAAACATGGCAAGAGCTGGATCCACTGTGACTTTCAGCTGCACTGCGGATTCTTATCCTGCAAGTCAGTTCAGCTGGTTCTTTAACAGCTCGTGGGTGGGAAATGGTCAAGTGTATGTGACTGCACCTCTGTCACACAACAGCAGTGGACAGTACACATGCATGGCCTTCAATGCCATAACAGGCAGCAACAGCAGCTCTGCTGTGCAGTTAACTGTAATTGATCCAGTTAGTAATGTTGTTGTGAACGTGGGCAATCAGCAACCAGTCTATAATCAACCATTCACACTTACCTGCACTGCCAGTGGAAATGTTGATTACATTCAGTGGGTGTTGAACGGCACAGACCTTCTTCCTCACGATGGAATCACTTTCACTAGTGATAACTCAACCTTGAGCTTCATCAATCTCACACTCAGTGATAACGGACATTATCAGTGTGAAGCAAGTAACGAGATCAGCAATATGACCAGTTCTGCATATGACCTGGTGGTCAACTATGGTCCATGGAGGGTAACAATTAATGGCCCAAGCATGGCAGAAACAGGATCCAGTGTGACTTTCAACTGCACTGCTGATTCTCTTCCTGCAAGTCAGTTCAGCTGGTTCTTCAACAGCTCATGGGTGGGAAATGGTCCAGTGTATGTGACTGCACCTCTGTCACACAACAGTACTGGACAGTACACTTGCATGGCCTTCAATGCCATTACAGGCATCAACAGCAGCTCTTCAGCTGTGCAGTTAAATGTAATTGATGCCATCACCACAGTGGACGTGACGGCCAGTCCTCTCATTCCTCTGGTTTCTAAAAGCCTGCAGCTCACCTGTAATGTGAATGGACCCTACATCAATCTTTACTGGCTTCGAAACAACAATAATTTCTTCCCATCAAACAGAATTACGTTTTCTGCTGACAACACCACAGTGACCTTCAGTTCATTGCAAACCACTGATGATGGAAGTTACCAGTGTGTCGCCGCCAATGCAATAAGACATCACGTCAGTAATCCATATAAACTTATGGTCATCTATGGACCACAAAGCATGCAGATCACTTTGCATCCTGGGATTCCTCCAGTCCTGACATGTCTAGCGGTATCTCAGCCACCCTCTGTGTATTACTGGATACTCGACAACAACACAGTTGTGGGGGATCAAGCTTCCATTACGATTCCTATTACATCTATCCTGGGCAGCAATTACACCTGTGTGGCCAAAAACCCTCTGACCAACTTGACTCTCTCCATCAGCCAAGTCGTCAGCTATCCCAACGCAGCTGACAGATTCCAGGCCAGTCATATGCTGATGGGCCTCCTCGTTCTGCTGTTCTCTTTACTACAGGAATGGCTGTAATTCTGAGACTGCTCTCAGGCCTATATATGAGGACTAACTGTCTGAATGAGGCTTGTAGGTATTTATCCCTTAACagcgaaaaataaataattactccAACCTATGAGGCAATCATAGTTCAGATTAGCTGAACTGCATCTtaattctaaaacatttaaacattatttacagaCATGCAGAGTAATTATTAACTGAACACATTTGGCAAACATAAACCAACATactgcattatttttttatatatttatttctaagAACTATAAGTGATCAGTTATTTAACTTGGTACtctaattttattcatttgtgaAAAGCTGAACTTTAGAGAGGCTGGCTTATTTCAGTTTGTAGTTTTTTGTTTGGAAAAGCCAACATCTGATTTAAGCAAATGACTTACCTGAATGAGCAACTATCCTAGCTACCTTTCTGCTTCACTGTTGTTTCTCATATCTTGGAATCAAAAAATCTTTTCTCAAAGAAATATAATGCAAAGTGTTTAAGTATATTCAAAATGATTATTCCGAAGATCAAAAAATGTGAAATGtcatatattttcattaataaaattaaataaaagcacaTTATTCAAATGA

Function

symbol description
ceacam1 Orthologous to human CEACAM1 (CEA cell adhesion molecule 1).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-010724-14 Orthologous to human CEACAM1 (CEA cell adhesion molecule 1).

Ensembl:

ensembl_id ENSDARG00000041119

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019502 True 3793 mRNA 0.43 13 11724230 11760596

Neighbor

gene id symbol gene type direction distance location
XLOC_009744 si:dkey-250k15.7 coding upstream 14471 11683548 ~ 11709759 (+)
XLOC_009743 si:dkey-250k15.10 coding upstream 43260 11660839 ~ 11680970 (+)
XLOC_009742 si:dkey-250k15.9 coding upstream 70752 11652591 ~ 11653478 (+)
XLOC_009741 cxcr3.1 coding upstream 82221 11623956 ~ 11642009 (+)
XLOC_009740 si:dkey-11o1.3 coding upstream 102679 11603096 ~ 11621551 (+)
XLOC_009746 si:dkey-250k15.4 coding downstream 18938 11779534 ~ 11785286 (+)
XLOC_009747 cxcr3.2 coding downstream 57530 11818126 ~ 11825303 (+)
XLOC_009748 cxcr3.3 coding downstream 73920 11834516 ~ 11840134 (+)
XLOC_009749 p3h3 coding downstream 231902 11992498 ~ 12006828 (+)
XLOC_009750 gnb3a coding downstream 261947 12022543 ~ 12049762 (+)
XLOC_009737 NA non-coding upstream 140352 11580652 ~ 11583878 (+)
XLOC_009736 NA non-coding upstream 145823 11573189 ~ 11578407 (+)
XLOC_009733 NA non-coding upstream 347385 11361760 ~ 11376845 (+)
XLOC_009724 NA non-coding upstream 1106544 10617354 ~ 10617686 (+)
XLOC_009719 CU929328.1 non-coding upstream 1334443 10387719 ~ 10389787 (+)
XLOC_009751 NA non-coding downstream 357035 12117631 ~ 12139336 (+)
XLOC_009755 CR388102.1 non-coding downstream 539573 12300169 ~ 12300286 (+)
XLOC_009756 CR388102.6 non-coding downstream 620134 12380730 ~ 12380846 (+)
XLOC_009764 NA non-coding downstream 1202364 12962960 ~ 12963877 (+)
XLOC_009765 NA non-coding downstream 1351668 13112264 ~ 13115609 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000016_04911596_04920356 NA coding CI01000016 null 4910169 ~ 4920819 (+)