CI01000052_02597704_02601005


Basic Information

Item Value
gene id CI01000052_02597704_02601005
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 2597556 ~ 2601852 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000052_02597704_02601005.mRNA
CTATAAAAACACGACTTTATACCCAGGGAACTTTGGAAGTGCTTGCTAATCTACTTGCTACTGCATTATTTAGCAAATAGGCCTTTCTTTGGCGTCCGTGCCAGCGTTATGTTTGGCTGGAACAGCAGAAGCAACTTCCCAGGCCAGAATGGCAGCCAAGGTCAATCCTCTTCTTATGTTAAGAGCATTTTCAGCTGTGCCACAGAAGAACAAGAGACCTAGCGAGAGTCCCTGGAAGGATTGTCTGGAGGCTCTGGAGGACGGCCACACTAACAGTGGCATGCACCTAGTGAAGCCGGAGAACACCAACAAGCTGATGCAGGTGTGGTGTGACCAAAGACAGGACCCTGGTGGCTGGACGGTCATCCAGAGAAGAGTGGATGGCTCTGTCAATTTCTTCAGAAACTGGGAGACATATAAGCAAGGCTTTGGAAACATTGATGGAGAGTATTGGCTGGGTCTGGAGAACATATACTGGATAACTAACCAGGGGAACTACAAGCTGCTGGTCACCTTGGAGGACTGGTCTGGACGCAAGACGTTTGCAGAGTATGCAAGTTTCCGCCTTGAACCTGAGACTGACTTCTACAGGCTCAGAGTGGGGCGTTACCATGGTAACGCCGGTGACTCCCTAACTTGGCACAACGGGAAGCAGTTTACCACTCTAGACAGGGATCGTGACGTATATACAGGCAACTGTGCACACTACCAAAAAGGAGGCTGGTGGTATAATGCCTGCGCCCACTCGAATCTGAACGGCGTGTGGTACAAGGGAGGGCACTACCGCAGCCGCTATCAGGACGGCGTGTACTGGGCTGAATTCAGAGGAGGCGCCTATTCCCTCAAGAAAGTGGTGATGATGATACGACCCAACCCGAACACCTTCCACTGAGCAGCACATAAACACAGGGAAGGGAATGAACTAATAATTGCTCCCTCATGGTCGCCGTTCACCCTATAAAGTGCAATTCGTTTAGACTGTGCTTTTTTAAATTGTTTTGCTTCCTACGTACATAGTTAGATACGATAGCACAAGGACAAACAGGGTCTTGGTTGACGTAACTGAGAAGGAACATCAACTTGTCAAAGACTACAAAGGAAGCTCTATTAAGTGCTATTTACATCCATTATCACAGAAAATGATGTGTCTGATGATTTGGCCTGTTTTACTTAAAATCATTGTCACTAGGAAGTCATCTAAACAAAAATATATAATGAACATGATGTGCTTTTTCACTCTAGTTCAATCAAATCAAATGAAACCTGTTCATCTTTAAATATTTAGTGCAATTGTGAATCTGTTGTCAGTTGTTTAGATTGTTTTTGTTAAATAGGTCGTACAATATTGAAATAACTGATTAGTACTCATTCATTGTTACAAATAAGACACAGGACATCCAATCCAGTGATAAATAGCTTACGCTTTCCTAGTTTATTCAAAGCTAAGAGAATATATATTTCCTGATGAGATGAATGACTCATAATTTATTTCAGGGATTTCATTTTTAAAATTCATAACATTTTGTAGTTTAAAAATATGCATAATTAAACATGAAAACATCTTAAAACAGTCATCGATTTCTCCATCTAAACTGTATTTACTGTGTAAATTAGCTGTTGGTGTCAAATGAAGACCCAACAGGTTTATGTACATATACACGTAATATTGTTGAAAATAATGTGTAATTTGTAATATACTGTAAGTGTAACATTTCCCCTGGTATTGTCAAACTGTTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000052_02597704_02601005.mRNA True 1739 mRNA 0.42 4 2597556 2601852

Neighbor

gene id symbol gene type direction distance location
CI01000052_02591303_02592790 NA coding upstream 4759 2588859 ~ 2592797 (+)
CI01000052_02468269_02501109 HMCN2 coding upstream 96382 2468269 ~ 2501174 (+)
CI01000052_02439580_02463549 HMCN2 coding upstream 131883 2439580 ~ 2465673 (+)
CI01000052_02417407_02438433 HMCN2 coding upstream 158632 2417372 ~ 2438924 (+)
CI01000052_02397395_02408461 MGC78985, NCS1A, NCS1B, NCS1.L, NCS1 coding upstream 189017 2397395 ~ 2408539 (+)
CI01000052_02622010_02627854 NA coding downstream 18389 2620241 ~ 2628310 (+)
CI01000052_02646977_02647792 NA coding downstream 44371 2646223 ~ 2647824 (+)
CI01000052_02845585_02849894 NA coding downstream 243698 2845550 ~ 2849978 (+)
CI01000052_02850485_02858740 NA coding downstream 248503 2850355 ~ 2858861 (+)
CI01000052_03401048_03405703 NA coding downstream 798418 3400270 ~ 3406312 (+)
G223866 NA non-coding upstream 71782 2520202 ~ 2525774 (+)
G223865 NA non-coding upstream 77915 2519404 ~ 2519641 (+)
G223864 NA non-coding upstream 79549 2517478 ~ 2518007 (+)
G223863 NA non-coding upstream 80667 2516599 ~ 2516889 (+)
G223858 NA non-coding upstream 88121 2509139 ~ 2509435 (+)
G223986 NA non-coding downstream 213229 2815081 ~ 2815308 (+)
G223990 NA non-coding downstream 218616 2820468 ~ 2820698 (+)
G223995 NA non-coding downstream 222688 2824540 ~ 2824758 (+)
G223996 NA non-coding downstream 224170 2826022 ~ 2826270 (+)
G224000 NA non-coding downstream 228490 2830342 ~ 2830547 (+)
G223694 NA other upstream 493257 2049326 ~ 2104299 (+)
G223545 NA other upstream 1326629 1270492 ~ 1270927 (+)
G224953 NA other downstream 829284 3431136 ~ 3460136 (+)

Expression


Co-expression Network