Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000052_02622010_02627854 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000052 |
| NCBI id | null |
| chromosome length | 3494004 |
| location | 2620241 ~ 2628310 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| LReO_3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000052_02622010_02627854.mRNA | False | 7322 | mRNA | 0.42 | 3 | 2620241 | 2628310 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000052_02597704_02601005 | NA | coding | upstream | 18389 | 2597556 ~ 2601852 (+) |
| CI01000052_02591303_02592790 | NA | coding | upstream | 27444 | 2588859 ~ 2592797 (+) |
| CI01000052_02468269_02501109 | HMCN2 | coding | upstream | 119067 | 2468269 ~ 2501174 (+) |
| CI01000052_02439580_02463549 | HMCN2 | coding | upstream | 154568 | 2439580 ~ 2465673 (+) |
| CI01000052_02417407_02438433 | HMCN2 | coding | upstream | 181317 | 2417372 ~ 2438924 (+) |
| CI01000052_02646977_02647792 | NA | coding | downstream | 17913 | 2646223 ~ 2647824 (+) |
| CI01000052_02845585_02849894 | NA | coding | downstream | 217240 | 2845550 ~ 2849978 (+) |
| CI01000052_02850485_02858740 | NA | coding | downstream | 222045 | 2850355 ~ 2858861 (+) |
| CI01000052_03401048_03405703 | NA | coding | downstream | 771960 | 3400270 ~ 3406312 (+) |
| CI01000052_03453140_03462799 | NA | coding | downstream | 824642 | 3452952 ~ 3462799 (+) |
| G223866 | NA | non-coding | upstream | 94467 | 2520202 ~ 2525774 (+) |
| G223865 | NA | non-coding | upstream | 100600 | 2519404 ~ 2519641 (+) |
| G223864 | NA | non-coding | upstream | 102234 | 2517478 ~ 2518007 (+) |
| G223863 | NA | non-coding | upstream | 103352 | 2516599 ~ 2516889 (+) |
| G223858 | NA | non-coding | upstream | 110806 | 2509139 ~ 2509435 (+) |
| G223986 | NA | non-coding | downstream | 186771 | 2815081 ~ 2815308 (+) |
| G223990 | NA | non-coding | downstream | 192158 | 2820468 ~ 2820698 (+) |
| G223995 | NA | non-coding | downstream | 196230 | 2824540 ~ 2824758 (+) |
| G223996 | NA | non-coding | downstream | 197712 | 2826022 ~ 2826270 (+) |
| G224000 | NA | non-coding | downstream | 202032 | 2830342 ~ 2830547 (+) |
| G223694 | NA | other | upstream | 515942 | 2049326 ~ 2104299 (+) |
| G223545 | NA | other | upstream | 1349314 | 1270492 ~ 1270927 (+) |
| G224953 | NA | other | downstream | 802826 | 3431136 ~ 3460136 (+) |
| CI01000052_02397395_02408461 | MGC78985, NCS1A, NCS1B, NCS1.L, NCS1 | coding | upstream | 132668 | 2397395 ~ 2408539 (+) |
| CI01000052_02374792_02389760 | NA | coding | upstream | 151104 | 2374712 ~ 2390103 (+) |
