CI01000052_02845585_02849894


Basic Information

Item Value
gene id CI01000052_02845585_02849894
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 2845550 ~ 2849978 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000052_02845585_02849894.mRNA
GAATAAAAGAAGAAAATCAGACAAAAAGAGGAAGAATGGCAAGGGCCACGACAGAGTCATTAAAAGGTGCTGAAAATAGCAGCGAGCCATCATCTGTTCTCATAGCACGGGTCAGGAGCGCTGACACTTCCAAAACTCCTCCTGTCAGGGCAGGGGGCCATTTGTATTCTCTCTCATTAGGCAATTTGACTAATGACCAGGCTGGGCTTTGGAGGGGCTCGGGCAGACCTCCTAGCCCAGGCTTTGGCTTCACCAGGCAGCAGCATCTATTGGAATGGCACAGATGTTTCTCATTGCCCCCAGTTCCTCGCCTTTTTGCTCTTCTCCCCTGGAACTTGTTTTTGGAAAGGTTACAGACGACTTATGAGGAGCTGAAGGGAATGAAAAAAGGAGCAACCATCCGTCAGGGTTCGGGGGCTGTGGGGATGACAATGCCGAAATTTTTCACAACACCTGACACTGCTATTAATAAGGCAATGATCCTCATAGCCACACTCATACTCACTTCAGCACACCCTCATCATTCACTCACTCTAACCGATCCCAGTGCTGAACTCACCACTCTAATCAGCAATTAATGACATGATGGTACCTGTGTACCAGGTCTAATCACATGTCAAGTATTGGCAGACTGAAAATCCCTATTGTAGTATTTGTTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000052_02845585_02849894.mRNA True 662 mRNA 0.47 3 2845550 2849978

Neighbor

gene id symbol gene type direction distance location
CI01000052_02646977_02647792 NA coding upstream 197726 2646223 ~ 2647824 (+)
CI01000052_02622010_02627854 NA coding upstream 217240 2620241 ~ 2628310 (+)
CI01000052_02597704_02601005 NA coding upstream 243698 2597556 ~ 2601852 (+)
CI01000052_02591303_02592790 NA coding upstream 252753 2588859 ~ 2592797 (+)
CI01000052_02468269_02501109 HMCN2 coding upstream 344376 2468269 ~ 2501174 (+)
CI01000052_02850485_02858740 NA coding downstream 377 2850355 ~ 2858861 (+)
CI01000052_03401048_03405703 NA coding downstream 550292 3400270 ~ 3406312 (+)
CI01000052_03453140_03462799 NA coding downstream 602974 3452952 ~ 3462799 (+)
CI01000052_03484560_03485959 NA coding downstream 634582 3484560 ~ 3486253 (+)
CI01000052_03490583_03492859 NA coding downstream 640169 3490147 ~ 3492859 (+)
G224000 NA non-coding upstream 15003 2830342 ~ 2830547 (+)
G223996 NA non-coding upstream 19280 2826022 ~ 2826270 (+)
G223995 NA non-coding upstream 20792 2824540 ~ 2824758 (+)
G223990 NA non-coding upstream 24852 2820468 ~ 2820698 (+)
G223986 NA non-coding upstream 30242 2815081 ~ 2815308 (+)
G224005 NA non-coding downstream 9143 2859121 ~ 2859352 (+)
G224606 NA non-coding downstream 69504 2919482 ~ 2919722 (+)
G224629 NA non-coding downstream 102930 2952908 ~ 2953214 (+)
G224630 NA non-coding downstream 103734 2953712 ~ 2953913 (+)
G224639 NA non-coding downstream 120740 2970718 ~ 2971283 (+)
G223694 NA other upstream 741251 2049326 ~ 2104299 (+)
G223545 NA other upstream 1574623 1270492 ~ 1270927 (+)
G224953 NA other downstream 581158 3431136 ~ 3460136 (+)

Expression


Co-expression Network