CI01000052_03401048_03405703


Basic Information

Item Value
gene id CI01000052_03401048_03405703
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 3400270 ~ 3406312 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000052_03401048_03405703.mRNA
CTATAAAGAGGGGGGAGTGGGGGCTGCTACAGTAAACGTTATGTTTATGTTGCATTTTCTAGTTGGAAGGGGAGTGACAGGGAGGAGTTTGAATTTTAGGTGTCAGTATGACACTGCAGTTCTTTGGAATCATTTACATTAATTGTTTCCATACTGAAATTTAACCAACACGAATAACTATGAATTTATTTGGTTGTAACTTAATATTCAAATAGTCAGAAATACAGACTCACATGTAAATGCGTTGGTTTGTACAGGTTTACTATTGAGGAATTATTAATTAAGTCGTGTCCATTTATTTTATGGAATTAATTTTAAGTTTAACTTAACTAAAATTTTAACTTCAGAGAGAAAAACCTGTATCAGTCTTTATGACATTATGAACTAAACCGTCTCACATACTCGCACTGAAAACTACAAGCGCAACTCAACCAGCCAATAGGGTTGAAGGAACCGTGTTCCTCCTCCTCCTCAAACAACTAAAGTTACGAAAAAACAAAACCTCAAAAACCGCAGCGTGTCTTATAATCCGACGATTGATTATTCTGTTGAACATTTGACTGGTTTTGTAGGCTATTTTTAGAGTTAGCCTAGATGTTTACATTGCACTTACTCTTTAGACTGCCGGTATAGTTTTAAAACCATAATATTTATATATTAAACTGGTTTTATTCTGAAACTAGCATGTTATATTATATATTATACTGGTAGGCTATATTAAAATGTATAGTAGCTTATATCAACAGCAGAGCATCCTGCAGTGCTGCTCTCCTCCTCTATGGAGCGCCGCTGGGCGGAGTCTCACACAACACTACAAATTCACATCTGCAGCATCTGCACTCACTACATCACCTCATTTCTGCCACTGACCCAAGAAGAAGGTCTGCAAGAACCACTAAAAGATGAGGAGGTGTCCAGTAGGGAGATGCTATTGGCTCTTTTCAGGGGTGGGGGCAATAAGAATTCAGCTGCAAAAACCACCATCCTCCACTCAACTAATTTCTTCCATATTGAGACTTTCTGTGATTTCCCCAGTAGATGGAGCCATTACCATAAAACACATGCAGCATCTTATTACTGTAATAAACTGGGTTTCGAGCCCTTGGCGTATCGTGGGCTGGAGACAGGCAGTCGTGATGTTGTGTCTCATGCAGTGAAACAGGGGAAGATTATTTATGTCTTCACCTCTGCCTTGAATCCTGGTAATAAAGAGATAGGAGATCACCTGGTGAAACATGGAGATGGTGTTAAAGATGTAGCATTCACTGTAGAGAACTGTGACTTCCTGGTAGAGAAAGCGAGAGAACGAGGTGCCATTATCGTTAAAGAGCCTCATGTTGTGGAGGATAAGTTTGGCAGGGTGAAGCTGGCAATACTTCAGACATATGGTGACACCACTCATACTCTTATAGAGCGGACAGGATATAACGGGCTCTTCCTCCCAGGATTCCATGCTCCTCTGTTCTGTGACCCTTTCTTGGCAAAACTGCCAAGCGGGAAGCTGGACTTCATTGACCATGTGGTTGGAAATCAGCCAGACAATGAGATGGCAGACAACATCAGACCTCTGTGCCAGGGTGAAAAGCATAAAAGAAGTCACGAGAGGCACTCGCTTAGAACATCGCAAGTCTTTGGGGGGAAACTCCCTATCCATGCCATCCAGTCAGAATACACCAAGAGCCCCTCCCCAGTGATCAGTCAGCAGTGTGTCTCCATGGAGTATGTGGAGTACTATGGTGGCCCAGGGGTTCAACACATCGCCATGAACACCTCTGACATCATTACAGCAGGGTTAGAATTGTTCTTTGTGAAAACTGAAAAAGTTTACTTTAGGTATATTGCATTGACAAGGATATGTTTTCAGATCCGTAACCTAAAGGAACGTGGTATGGAGTTCATGTCAGTGCCTGACACTTATTACCAGCAGCTCAAGGAGAAGCTGAAGCTTTCCAAAGTCAAAATTGTTGAGGACATCAGCATACTGGAGGTACAATACAATTATAAAACAGCTTACTATCAGAAGGAACTTAAAATCTTGGTGGATTATGATGACAATGGCTACTTGCTTCAGATCTTTACCAAACCAGTACAGGACAGGCCCACCGTGTTTCTAGAGGTCATCCAGAGACACAACCATCAAGGTTTTGGTGCTGGAAATTTCAAATCTCTGTTTGAGGCTATTGAAGCTGACCAGAACGCCAGAGGAAACCTCACCATCCTTACACCCAATGGCATATCGGAGAAACTCTGAACAGGCTATTCATAGTAAATGCATGGTACATGTTAAAATATGGCTAATAATTTACTTTGTTTGGTATATTTGGCATATTTTTGTTTGGCTTTCAAGCATGTGCCATTATATTTTGTATCCACATGTTTCTTTACCAACAGACGCTTTTGACCCTGTGGACTTATAGAAAAAAAACTGTATCATGAACATTTCCACCACAGTGTCTTATCCACCACATCTCAACATATGTTTTATGTTTAACAGCATTCTGTGGTGGAAATAACTGTAGTGGAAAATACATTTTTGGAATAAAATGTCCTTCATCTTAAAGCTAATTTCATTGTTTATGTATCACTTCACTTATGCATAATTTGACAAAATTACAGCTTGATTGGAAATGAAGCGCAATAAAAAAAAACAAATATTCTTTTCATTACAATAATCGTGATTTTTCTTTGTTTCACGTCTTATTTTTCATCTCAAATTCTTAACTGAGACTGCCTCCTTGGTAAATAAGCACACTACTTTTACAATAAACCTTATGGCCAAAAATGTTTATTGTGTTTGAAATAACGCCGCTGCAAATTAACGTTACTGTCGTAATTTGTGTAAAAGAATCATATCATATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000052_03401048_03405703.mRNA True 2860 mRNA 0.39 13 3400270 3406312

Neighbor

gene id symbol gene type direction distance location
CI01000052_02850485_02858740 NA coding upstream 541409 2850355 ~ 2858861 (+)
CI01000052_02845585_02849894 NA coding upstream 550292 2845550 ~ 2849978 (+)
CI01000052_02646977_02647792 NA coding upstream 752446 2646223 ~ 2647824 (+)
CI01000052_02622010_02627854 NA coding upstream 771960 2620241 ~ 2628310 (+)
CI01000052_02597704_02601005 NA coding upstream 798418 2597556 ~ 2601852 (+)
CI01000052_03453140_03462799 NA coding downstream 46640 3452952 ~ 3462799 (+)
CI01000052_03484560_03485959 NA coding downstream 78248 3484560 ~ 3486253 (+)
CI01000052_03490583_03492859 NA coding downstream 83835 3490147 ~ 3492859 (+)
G224891 NA non-coding upstream 20106 3379067 ~ 3380164 (+)
G224898 NA non-coding upstream 53558 3345273 ~ 3346712 (+)
G224899 NA non-coding upstream 120005 3280024 ~ 3280265 (+)
G224863 NA non-coding upstream 151212 3248733 ~ 3249058 (+)
G224852 NA non-coding upstream 166586 3233481 ~ 3233684 (+)
G224949 NA non-coding downstream 20027 3426339 ~ 3427764 (+)
G223694 NA other upstream 1295971 2049326 ~ 2104299 (+)
G223545 NA other upstream 2129343 1270492 ~ 1270927 (+)
G224953 NA other downstream 24824 3431136 ~ 3460136 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035829 hpdb coding NC_007119.7 CM002892.2 34731982 ~ 34742234 (+)