CI01000052_03453140_03462799


Basic Information

Item Value
gene id CI01000052_03453140_03462799
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 3452952 ~ 3462799 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000052_03453140_03462799.mRNA
CTATATAAACCCATAAACTCTGTTGAAACAGCTTGGTCAGCATGAATTTCTATGCACAAGCAGGAAGGTGTGGTTAAGTGTATTACCTAATTGTGATGTTTACCTAGTTGTTTACAGTAGGATGGACATGTATCATTTATATGTATTTCATTTTATTATTTATAGTTTAAAAAAACAACAAAGATCAGATGTTTTTCAACAAAAAGTCAAGTTTGGAGGGTTCTCACTCACTGATAGCTTTGGCAACATATATAGCTGGACAGACACCATTTCCAGAGTTCAGTGTTGTGCTGATGTTGGATGATCTGCAAATAGGATATTATGACTCAATCACATGGAAACCTGTCTTTCGCACTAACAGGGATTCAGAATACTACGATGAAGAGCAAAGTGATGCTGATACTGTATTTAACGACATGTATAAGGGCATGAAATCTCGGGATTCTGATGTTAAGAAACACTTAAATATCACAGATGGAATACATGTTCATCAGAGACTTGTTGGATGTGAACTTTTGAATGATGATAAACCAGGTCCACTTCATTTCTGGGATGCTTTTGATGAACAATGTATGGAGGAGTTCACATATGACCAGGAAATAAACGATATCCAGATGAAAAAGCCATGGATGATATCAAGGGACCAAGTGAAACAGCGTCATATAAAGTTTCTATATGAAAGAGTTTATCATCCTATTTGCATTAAAACTTTGCGGAGGTACCTGAATATGGAAAAGAACAATGTGATGAGAAAAGATGAGAGAATCAACCTGATTAACTTCAGTATAAAGAGAGAAAAAAGCATAATCAACAAATATGACCCAACAGTTGTACTGAGTTTGAAACCCAGAGTCAGACTCATGAGGAAGACACTCACAGACTCTCAAGGGCTTCAGATCAGCTGTCTGGCCACTGGTTTTTACCCCCGTCACATTAACCTGACTCTGTTCAGAGATGGTCAGCCTGTGGATGATGATCAGATCACAGGAGGAGAGATTCTGCCCAACGGAGACGGAACTTACCAGATGAGGAAGAGTTTGGTGATCAGCGCAGAAGAACTACGTGAAAAACATAAATACAACTGCACAATGAAGCACCTCAATCTGGACAACAAACTGGACATTACATTTGTTTCAGATGTGGCTGAATGTGACCCAGGATCCCTCAGTCTGTCTGTAGTTATCAGTGTGCTGGTGTTACTGTGTGTGGCTGTTCTCATCATAACTGCACTCATCATCTGGAGGAAGAAGAGACGTGCTGCTGGACGAGTCTCTGAGATGTCACAGTGTAAATACTTCCCTACTCCATGTTCTCACTCACTGATAGCTTTGGCAACATATATAGTTGGACAGACACCATTTCCAGAGTTCAGTGTTGTGGTGATGTTGGATGATCTGAAAATAGTGTATTATGACTCAGTCACATGGAAAGCTGTCTATCGCTCTCACAGTGATTCAAAATACTATGATGAAGAGCAAAGTGATGCTGGTTTTATATTTCAGGACACACATAATGACATGAAAACTCATAATTTTTACGTTACGAAACACATAAATCACACAGATGTTTTGCAGAGGTACCTGAATATGGAAAAGAACAATGTGATGAGAAAAGTGAAACCCAGAGTCAGACTCATGAGGAAGACACTCACAGACTCTCAAGGGCTTCAGATCAGCTGTCTGGCCACTGGTTTTTACCCCCGTCACATTAACCTGACTCTGTTCAGAGATGGTCAGCCTGTGGATGATGATCAGATCACAGGAGGAGAGATTCTGCCCAACAGAGATGGAACTTACCAGATGAGGAAGAGTTTAGTGATCAGCGCAGAAGAACTACGTGAAAAACATAAATACAACTGCACAATGAAGCACCTCAATCTGGACAACAAACTGGACATTACATTTGATGTGGCTGAATGTGACCCAGGATCCCTCAGTCTGTCTGTAGTTATCAGTGTGCTGGTGTTACTGTGTGTGGCTGTTCTCATCATAACTGCACTCATCATCTGGAGGAAGAAGAGACGTGCTGCTGGACGAGTCTCCGAGATGTCACAGTGTAAATACTTCCCTACTCCAT

Function

NR:

description
nonclassical MHC class I antigen

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000052_03453140_03462799.mRNA True 2076 mRNA 0.41 11 3452952 3462799

Neighbor

gene id symbol gene type direction distance location
CI01000052_03401048_03405703 NA coding upstream 46640 3400270 ~ 3406312 (+)
CI01000052_02850485_02858740 NA coding upstream 594091 2850355 ~ 2858861 (+)
CI01000052_02845585_02849894 NA coding upstream 602974 2845550 ~ 2849978 (+)
CI01000052_02646977_02647792 NA coding upstream 805128 2646223 ~ 2647824 (+)
CI01000052_02622010_02627854 NA coding upstream 824642 2620241 ~ 2628310 (+)
CI01000052_03484560_03485959 NA coding downstream 21761 3484560 ~ 3486253 (+)
CI01000052_03490583_03492859 NA coding downstream 27348 3490147 ~ 3492859 (+)
G224949 NA non-coding upstream 25188 3426339 ~ 3427764 (+)
G224891 NA non-coding upstream 72788 3379067 ~ 3380164 (+)
G224898 NA non-coding upstream 106240 3345273 ~ 3346712 (+)
G224899 NA non-coding upstream 172687 3280024 ~ 3280265 (+)
G224863 NA non-coding upstream 203894 3248733 ~ 3249058 (+)
G223694 NA other upstream 1348653 2049326 ~ 2104299 (+)
G223545 NA other upstream 2182025 1270492 ~ 1270927 (+)

Expression


Co-expression Network