XLOC_009761 (epn1)


Basic Information

Item Value
gene id XLOC_009761
gene name epn1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 12730311 ~ 12756528 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019525
GGGCGCGGTCCGTCCGGCAGCGGGGAAACGGAAGCGGAAGTGCCGCCATCTCCTCGTACCATCCGAGCAACAGCAGGGTCAGTACAGACGATATTTGGGGAGGTATTGTAGTCTATTACGTTAGTACAAGCGGTTACATGACgcgttatttgtttaaatgaCGAACGCGACTCGAGGGGTGATAGTCGTGAAGGAAGAGCAGCGTCGCGTCACTCTGTCACGCACACGCGCGCGTCTCTTTATGAGTTGAGTTAGCATAGCGGCGCGCTCCCGTCTCTAAATGAGTGTTTTTAATTCAGCGCCGTGACAGAAACAGCAGCGCTTCGCTTTTCTGCCGTCTTCGCTGGTAAGAACCCGCTTTCTGGTGCTCGGCTAGATGTCTGGGCGTGTTTGAGAAGCACAACAGAAGCGCAACGTTATTTCACCCCACATCTGTGCTTCCTGGCCCTCATGTGGCGGCCGTGCGGAGGTTTGGAAGAGTGGACAGGCTAAACTGAAAGACCCCGACCTGAACACGTGcacagagagagagcgagaggggGGGAGAGAGACTGACACTCCCAGATTTTGCAGAACCTGATAGCCAGCCTGTTGCCATGTCGACATCATCGCTGAGGCGACAAGTCAAGAACATTGTTCACAATTACTCAGAGGCGGAGATAAAGGTAAGGGAAGCAACTTCTAATGATCCATGGGGTCCCTCAAGTTCTCTGATGTCAGAGATCGCTGACCTGACATACAATGTAGTGGCCTTCTCAGAGATTATGAGCATGGTCTGGAAGAGACTCAACGACCATGGGAAAAACTGGAGACATGTATATAAAGCTATGACACTGATGGAGTATCTGATAAAGACGGGTTCAGAGCGCGTAGCACAGCAATGCAGGGAAAACATCTACGCCGTTCAAACGCTTAAAGACTTCCAGTACATAGACAGAGACGGCAAAGACCAGGGTGTGAATGTACGGGAAAAGGCCAAGCAACTGGTGACTCTGCTAAAAGACGAGGAGAGGCTACGAGAGGAGAGGATCCATGCACTCAAGACCAAAGAGAAGATGGCACAGACCAGCAGTGCATCTTCGGCCCCTTCTGCTCCTGCTTTAGGGGGAGGAGGAGTGCACTCGGGAGCAGACTCTGATCAGGCGTGGCCCCAGAGCTCCGGTGAGGAGGACCTGCAGCTCCAGCTGGCACTGGCCATGAGCAAGGAGGAGGCGGAGCAGAAGAGACCGTGCTGTGATAAGACTACACATGACCCTCTGGAAGATGCAGAGATCCGCTACGCACTCACAATCAGCCAGGAGACCCACCAACAGGAGGAGCGTCTGCGCAGGGGAGACGACCTGAGGCTGCAGATGGCCATCGAGGAGAGTAAGAGGGAGAAAACCAAGCCCGAGGAGTCGTCTCTGATGGAGTTAAGCGCTGCAGACCCGTGGGGAGCTCCTGCGACAGGCTCTGCAGGACCCTCTCCTCCTCCTGCTTTGGGTCCCGCATCTACTGCTGGCCCTTGGGGACCTCCTGATCCATGGGGAGCCACTTCCCCTGCCTCTCCCCCGAGTGCTGATCCTTGGGCAGGAGCACCAGCAACCGTAGCTCCAGACCCATGGAGTGATTCGTCCTCCAGAGTAAATTCTGACCCCTGGGCATCCACAGCTGTGACCCCACCAAGTGCCGACCCTTGGGCTCACTCAGTGGCTCCGGCCCCTACGCCGCTCTCAGGGTCAACGGATCCCTGGGCTGCGGAAGGAGCCGCCCCTGCCACTGACGGTCTGACCTCTGATCCCTGGAGTGGCTCAGTTAAACAAACTAACGGCACAGCAGATCCAGAGAGAAGAGGTTCCTCAGTGACATGTGATGCAGGAGGAGGTGGCAGCACAGGCTCTCCTGTGCCCTTTGACCTTTCATCGCTTGGTAGCTCTTTGCCTGTTCGGAAAACACCAGAGTCATTTTTGGGGCCCAACGCAGCACTGGTGGATTTGGACTCACTAGTATCATCAAAACCCAAACCAAAACAACCACCCCCACCAAGCATCTCCTCCACATCTAACAACCCCTTCCTCCAGACACAGgGGCCTTCCTCAACAGGTATGGGAGTTACCCCAGGAAGTACCATTTCAAGTAGAGGAGTATCTCCGACTCCACCTTCGGCTTCTAATCCTTTTGGCGCGACCCCAATGGCATCAATCTCCCCTCAACCCTCTTCACTTGGTCTGAACCAGCTGCGTACAAGCCCCGTTCCCCCAAATCCCATGCTGGGTCACATGCCTCCGCCAGTAGTAGGAATGGTTCAGCCAGGAATGGGCATGCCAGGAATGGGGGTCCCTATGGCGGCCCCCGGTTTAAGCATGGGAATGGGCATGCCTTACGGTGGAATATCCCCTATGGGTCCAGGAGGAAACCCCTTGCTGATGGGTCCAGGAGGACCTGCGCAGCCTTCACTGATTTTGGGCGGGCCATCAGGAGTGGGCGGAGTAATGGGAACAGGGGGATCCATGGGAGGTGGAACCACAGGCACAAGCACCAATCCTTTCCTTCTTTGAGAGATTTCGCCAATCCCACTGGCCCTGTGCACTCAACAACCAATCCAAACCTGCCCTACCAACACAAAcagtttgtgttcaacaaaaacaaatgtgtgttcaTCTCTATATTTAAtgaaaagtaaaaacaacaacgtGTTCTTTTCTGTCACAAACAgcatttcagttttgttttgttcttttatttcCCCCGTTTTATTTGACAGTATTTGAAGTCTATTTATTTCCCTATTGAGTTTTGGTTTCTTTGACAGACATGGATGATTGGTGGGTTCATTCAATGAATGCAGGCTgttaatattgttatattattaagaTGATTGTTGTTGCTCAGAATCAGGAATATGAAGAAATGGGAGGAGGAAAACAAGCCACTAATGAACTTAATCACACACCCTGATTTCTCCCCCCCTCCTTTCATTGATGATGGAAGAGCCGGTGGCCCTCTAAAGAAAGAGCGCATGAAGGATGTCTGACGGACTGGCCCTGAATGGATTCAGAAGGATTCGGCTGTCCGTTTTATTCACAACTCTAGTAAAAATCATTTGATAGAtgtattacttttaatttaatttaatgtgtaatcttgtgtaatttattttaatcgtATGTCTCTGACTCCTGGAAACGATTAAACCAAGGAAAATCGCACTGGAAATTGCCATTGAAACAGATGCCTGCTCGGTCTCTGGCCTGCAACATTTCAGTCCATACCGCATGGTTCATACACACATGAGGAGCGAGTGTGTTTATGTGAGAGAGTGTTTGACATGTCCAGTGTTTCACTTGGCCCACTGCTGTGCTTTTGATGGGGTAATCAGCATTGTCTTTATAAGAGTCCTAATTTTCAGCCACTTATTTTTGCAGtcgtgaaaaaaaagaaagaaaatcgaAGCATTAATTCAACACCTGTTCACTTGAGAAACAGCGCTTGTCTTTGCATTTCACTTCAGCACCTTTGTCCTTCTACATTCACACAGAAAACAGGAAAGTGTTAACGCTTCTGAAACTGAAAATTGTCTGAATGATTTTGTGAAATCAGATTATAAAAATGGGGACTGAATGATACGATCCATGCTGTTATCCTTTATTtactttcaaattattttatatatataaatatatatatatatgaacattttAGAGATATTTCTCTAATATTGGCTATGGTCAAAAAGTGTGTGGTGTTGACTGTGAacattcacataaaaaaaataaaatggagaaaaaaaatcaaaaggaatttaagaaataaaataaaaatccacaaaACAAAA
>TCONS_00019526
ACGGAAGCGGAAGTGCCGCCATCTCCTCGTACCATCCGAGCAACAGCAGGGTCAGTACAGACGATATTTGGGGAGGTATTGTAGTCTATTACGTTAGTACAAGCGGTTACATGACgcgttatttgtttaaatgaCGAACGCGACTCGAGGGGTGATAGTCGTGAAGGAAGAGCAGCGTCGCGTCACTCTGTCACGCACACGCGCGCGTCTCTTTATGAGTTGAGTTAGCATAGCGGCGCGCTCCCGTCTCTAAATGAGTGTTTTTAATTCAGCGCCGTGACAGAAACAGCAGCGCTTCGCTTTTCTGCCGTCTTCGCTGGTAAGAACCCGCTTTCTGGTGCTCGGCTAGATGTCTGGGCGTGTTTGAGAAGCACAACAGAAGCGCAACGTTATTTCACCCCACATCTGTGCTTCCTGGCCCTCATGTGGCGGCCGTGCGGAGGTTTGGAAGAGTGGACAGGCTAAACTGAAAGACCCCGACCTGAACACGTGcacagagagagagcgagaggggGGGAGAGAGACTGACACTCCCAGATTTTGCAGAACCTGATAGCCAGCCTGTTGCCATGTCGACATCATCGCTGAGGCGACAAGTCAAGAACATTGTTCACAATTACTCAGAGGCGGAGATAAAGGTAAGGGAAGCAACTTCTAATGATCCATGGGGTCCCTCAAGTTCTCTGATGTCAGAGATCGCTGACCTGACATACAATGTAGTGGCCTTCTCAGAGATTATGAGCATGGTCTGGAAGAGACTCAACGACCATGGGAAAAACTGGAGACATGTATATAAAGCTATGACACTGATGGAGTATCTGATAAAGACGGGTTCAGAGCGCGTAGCACAGCAATGCAGGGAAAACATCTACGCCGTTCAAACGCTTAAAGACTTCCAGTACATAGACAGAGACGGCAAAGACCAGGGTGTGAATGTACGGGAAAAGGCCAAGCAACTGGTGACTCTGCTAAAAGACGAGGAGAGGCTACGAGAGGAGAGGATCCATGCACTCAAGACCAAAGAGAAGATGGCACAGACCAGCAGTGGGGGAGGAGGAGTGCACTCGGGAGCAGACTCTGATCAGGCGTGGCCCCAGAGCTCCGGTGAGGAGGACCTGCAGCTCCAGCTGGCACTGGCCATGAGCAAGGAGGAGGCGGAGCAGAAGAGACCGTGCTGTGATAAGACTACACATGACCCTCTGGAAGATGCAGAGATCCGCTACGCACTCACAATCAGCCAGGAGACCCACCAACAGGAGGAGCGTCTGCGCAGGGGAGACGACCTGAGGCTGCAGATGGCCATCGAGGAGAGTAAGAGGGAGAAAACCAAGCCCGAGGAGTCGTCTCTGATGGAGTTAAGCGCTGCAGACCCGTGGGGAGCTCCTGCGACAGGCTCTGCAGGACCCTCTCCTCCTCCTGCTTTGGGTCCCGCATCTACTGCTGGCCCTTGGGGACCTCCTGATCCATGGGGAGCCACTTCCCCTGCCTCTCCCCCGAGTGCTGATCCTTGGGCAGGAGCACCAGCAACCGTAGCTCCAGACCCATGGAGTGATTCGTCCTCCAGAGTAAATTCTGACCCCTGGGCATCCACAGCTGTGACCCCACCAAGTGCCGACCCTTGGGCTCACTCAGTGGCTCCGGCCCCTACGCCGCTCTCAGGGTCAACGGATCCCTGGGCTGCGGAAGGAGCCGCCCCTGCCACTGACGGTCTGACCTCTGATCCCTGGAGTGGCTCAGTTAAACAAACTAACGGCACAGCAGATCCAGAGAGAAGAGGTTCCTCAGTGACATGTGATGCAGGAGGAGGTGGCAGCACAGGCTCTCCTGTGCCCTTTGACCTTTCATCGCTTGGTAGCTCTTTGCCTGTTCGGAAAACACCAGAGTCATTTTTGGGGCCCAACGCAGCACTGGTGGATTTGGACTCACTAGTATCATCAAAACCCAAACCAAAACAACCACCCCCACCAAGCATCTCCTCCACATCTAACAACCCCTTCCTCCAGACACAGgGGCCTTCCTCAACAGGTATGGGAGTTACCCCAGGAAGTACCATTTCAAGTAGAGGAGTATCTCCGACTCCACCTTCGGCTTCTAATCCTTTTGGCGCGACCCCAATGGCATCAATCTCCCCTCAACCCTCTTCACTTGGTCTGAACCAGCTGCGTACAAGCCCCGTTCCCCCAAATCCCATGCTGGGTCACATGCCTCCGCCAGTAGTAGGAATGGTTCAGCCAGGAATGGGCATGCCAGGAATGGGGGTCCCTATGGCGGCCCCCGGTTTAAGCATGGGAATGGGCATGCCTTACGGTGGAATATCCCCTATGGGTCCAGGAGGAAACCCCTTGCTGATGGGTCCAGGAGGACCTGCGCAGCCTTCACTGATTTTGGGCGGGCCATCAGGAGTGGGCGGAGTAATGGGAACAGGGGGATCCATGGGAGGTGGAACCACAGGCACAAGCACCAATCCTTTCCTTCTTTGAGAGATTTCGCCAATCCCACTGGCCCTGTGCACTCAACAACCAATCCAAACCTGCCCTACCAACACAAAcagtttgtgttcaacaaaaacaaatgtgtgttcaTCTCTATATTTAAtgaaaagtaaaaacaacaacgtGTTCTTTTCTGTCACAAACAgcatttcagttttgttttgttcttttatttcCCCCGTTTTATTTGACAGTATTTGAAGTCTATTTATTTCCCTATTGAGTTTTGGTTTCTTTGACAGACATGGATGATTGGTGGGTTCATTCAATGAATGCAGGCTgttaatattgttatattattaagaTGATTGTTGTTGCTCAGAATCAGGAATATGAAGAAATGGGAGGAGGAAAACAAGCCACTAATGAACTTAATCACACACCCTGATTTCTCCCCCCCTCCTTTCATTGATGATGGAAGAGCCGGTGGCCCTCTAAAGAAAGAGCGCATGAAGGATGTCTGACGGACTGGCCCTGAATGGATTCAGAAGGATTCGGCTGTCCGTTTTATTCACAACTCTAGTAAAAATCATTTGATAGAtgtattacttttaatttaatttaatgtgtaatcttgtgtaatttattttaatcgtATGTCTCTGACTCCTGGAAACGATTAAACCAAGGAAAATCGCACTGGAAATTGCCATTGAAACAGATGCCTGCTCGGTCTCTGGCCTGCAACATTTCAGTCCATACCGCATGGTTCATACACACATGAGGAGCGAGTGTGTTTATGTGAGAGAGTGTTTGACATGTCCAGTGTTTCACTTGGCCCACTGCTGTGCTTTTGATGGGGTAATCAGCATTGTCTTTATAAGAGTCCTAATTTTCAGCCACTTATTTTTGCAGtcgtgaaaaaaaagaaagaaaatcgaAGCATTAATTCAACACCTGTTCACTTGAGAAACAGCGCTTGTCTTTGCATTTCACTTCAGCACCTTTGTCCTTCTACATTCACACAGAAAACAGGAAAGTGTTAACGCTTCTGAAACTGAAAATTGTCTGAATGATTTTGTGAAATCAGATTATAAAAATGGGGACTGAATGATACGATCCATGCTGTTATCCTTTATTtactttcaaattattttatatatataaatatatatatatatgaacattttAGAGATATTTCTCTAATATTGGCTATGGTCAAAAAGTGTGTGGTGTTGACTGTGAacattcacataaaaaaaataaaatggagaaaaaaaatcaaaaggaatttaagaaataaaataaaaatccacaaaACAAAA
>TCONS_00019527
AAAACTGGAGACATGTATATAAAGCTATGACACTGATGGAGTATCTGATAAAGACGGGTTCAGAGCGCGTAGCACAGCAATGCAGGGAAAACATCTACGCCGTTCAAACGCTTAAAGACTTCCAGTACATAGACAGAGACGGCAAAGACCAGGGTGTGAATGTACGGGAAAAGGCCAAGCAACTGGTGACTCTGCTAAAAGACGAGGAGAGGCTACGAGAGGAGAGGATCCATGCACTCAAGACCAAAGAGAAGATGGCACAGACCAGCAGTGCATCTTCGGCCCCTTCTGCTCCTGCTTTAGGGGGAGGAGGAGTGCACTCGGGAGCAGACTCTGATCAGGCGTGGCCCCAGAGCTCCGGTGAGGAGGACCTGCAGCTCCAGCTGGCACTGGCCATGAGCAAGGAGGAGGCGGAGCAGAAGAGACCGTGCTGTGATAAGACTACACATGACCCTCTGGAAGATGCAGAGATCCGCTACGCACTCACAATCAGCCAGGAGACCCACCAACAGGAGGAGCGTCTGCGCAGGGGAGACGACCTGAGGCTGCAGATGGCCATCGAGGAGAGTAAGAGGGAGAAAACCAAGCCCGAGGAGTCGTCTCTGATGGAGTTAAGCGCTGCAGACCCGTGGGGAGCTCCTGCGACAGGCTCTGCAGGACCCTCTCCTCCTCCTGCTTTGGGTCCCGCATCTACTGCTGGCCCTTGGGG
>TCONS_00019528
CACTGATGGAGTATCTGATAAAGACGGGTTCAGAGCGCGTAGCACAGCAATGCAGGGAAAACATCTACGCCGTTCAAACGCTTAAAGACTTCCAGTACATAGACAGAGACGGCAAAGACCAGGGTGTGAATGTACGGGAAAAGGCCAAGCAACTGGTGACTCTGCTAAAAGACGAGGAGAGGCTACGAGAGGAGAGGATCCATGCACTCAAGACCAAAGAGAAGATGGCACAGACCAGCAGTGGGGGAGGAGGAGTGCACTCGGGAGCAGACTCTGATCAGGCGTGGCCCCAGAGCTCCGGTGAGGAGGACCTGCAGCTCCAGCTGGCACTGGCCATGAGCAAGGAGGAGGCGGAGCAGGTAAAGTCTCAGCCAATCAGCAATTAGGTTCAGGCTGCAGGTAACGTGTAGTACTGACGTGGTTCAGAGTCTGAGGAAGATGATAGTTGTTCTACTAGAAGTGCATTTTTAAGAGACCTAAATGTATAGGATGCTATACAGTTAGTTGGTTGTTTGTACAAAATAAACGCATCCTTTTAGTCCTAAGGGTGTTGTTCATTTTGCGTATTGCCCAGTTGACTGTACAGTATCCTgtttattacatggctacttatcaaataaatacattacattaatttgagt
>TCONS_00019529
CCTGCCAATAATAACCATATTTAAAGCACCCTAAATCTGCTGCCTTCGCTAATTGCCATCATAAAATAGAAATATTGGTTATTTTCTCTAAAGTATAATGACACACATTCAACTAGGGCCCTTCCTCTGCACAGTTTCTGCACATTTTCCCTCACTTCTTCACTCACACCTGTCCTCATCCTGCCCCCCCTCATTCAGACTACACATGACCCTCTGGAAGATGCAGAGATCCGCTACGCACTCACAATCAGCCAGGAGACCCACCAACAGGAGGAGCGTCTGCGCAGGGGAGACGACCTGAGGCTGCAGATGGCCATCGAGGAGAGTAAGAGGGAGAAAACCAAGCCCGAGGAGTCGTCTCTGATGGAGTTAAGCGCTGCAGACCCGTGGGGAGCTCCTGCGACAGGCTCTGCAGGACCCTCTCCTCCTCCTGCTTTGGGTCCCGCATCTACTGCTGGCCCTTGGGGACCTCCTGATCCATGGGGAGCCACTTCCCCTGCCTCTCCCCCGAGTGCTGATCCTTGGGCAGGAGCACCAGCAACCGTAGCTCCAGACCCATGGAGTGATTCGTCCTCCAGAGTAAATTCTGACCCCTGGGCATCCACAGCTGTGACCCCACCAAGTGCCGACCCTTGGGCTCACTCAGTGGCTCCGGCCCCTACGCCGCTCTCAG

Function

symbol description
epn1 Predicted to enable clathrin adaptor activity and phospholipid binding activity. Involved in negative regulation of sprouting angiogenesis. Predicted to be located in presynapse. Predicted to be extrinsic component of cytoplasmic side of plasma membrane; extrinsic component of postsynaptic membrane; and extrinsic component of presynaptic membrane. Predicted to be part of clathrin vesicle coat. Predicted to be active in several cellular components, including Schaffer collateral - CA1 synapse; endosome; and postsynapse.

GO:

id name namespace
GO:0006897 endocytosis biological_process
GO:0005768 endosome cellular_component
GO:0030125 clathrin vesicle coat cellular_component
GO:0005886 plasma membrane cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0005543 phospholipid binding molecular_function
GO:0030276 clathrin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2680 Predicted to enable clathrin binding activity and phospholipid binding activity. Predicted to be involved in endocytosis. Predicted to be located in cytoplasm. Predicted to be part of clathrin vesicle coat. Predicted to be active in endosome and plasma membrane. Orthologous to human EPN1 (epsin 1).

Ensembl:

ensembl_id ENSDARG00000010411

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019525 False 3814 mRNA 0.49 14 12730311 12756528
TCONS_00019526 False 3757 mRNA 0.49 14 12730338 12756528
TCONS_00019527 False 709 mRNA 0.56 8 12740790 12748603
TCONS_00019528 False 641 lncRNA 0.47 3 12740912 12744284
TCONS_00019529 True 673 lncRNA 0.56 4 12747218 12748918

Neighbor

gene id symbol gene type direction distance location
XLOC_009760 aicda coding upstream 64659 12660477 ~ 12665652 (+)
XLOC_009759 nat14 coding upstream 90558 12632428 ~ 12639753 (+)
XLOC_009758 il11a coding upstream 113156 12611362 ~ 12617155 (+)
XLOC_009757 rasip1 coding upstream 169589 12517535 ~ 12560722 (+)
XLOC_009756 CR388102.6 coding upstream 349465 12380730 ~ 12380846 (+)
XLOC_009762 u2af2a coding downstream 55686 12812214 ~ 12821768 (+)
XLOC_009763 cacng6b coding downstream 79615 12836143 ~ 12866551 (+)
XLOC_009764 NA coding downstream 206432 12962960 ~ 12963877 (+)
XLOC_009765 NA coding downstream 355736 13112264 ~ 13115609 (+)
XLOC_009766 NA coding downstream 412344 13168872 ~ 13172698 (+)
XLOC_009755 CR388102.1 non-coding upstream 430025 12300169 ~ 12300286 (+)
XLOC_009751 NA non-coding upstream 590975 12117631 ~ 12139336 (+)
XLOC_009737 NA non-coding upstream 1146433 11580652 ~ 11583878 (+)
XLOC_009736 NA non-coding upstream 1151904 11573189 ~ 11578407 (+)
XLOC_009768 NA non-coding downstream 742833 13499361 ~ 13501965 (+)
XLOC_009769 NA non-coding downstream 856126 13612654 ~ 13614188 (+)

Expression


Co-expression Network