Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_009763 |
| gene name | cacng6b |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 12836143 ~ 12866551 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| cacng6b | Predicted to enable calcium channel regulator activity. Predicted to be involved in regulation of calcium ion transmembrane transport via high voltage-gated calcium channel. Predicted to act upstream of or within calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of L-type voltage-gated calcium channel complex. Human ortholog(s) of this gene implicated in aspirin-induced respiratory disease. Orthologous to human CACNG6 (calcium voltage-gated channel auxiliary subunit gamma 6). |
| id | name | namespace |
|---|---|---|
| GO:0070588 | calcium ion transmembrane transport | biological_process |
| GO:1902514 | regulation of calcium ion transmembrane transport via high voltage-gated calcium channel | biological_process |
| GO:1990454 | L-type voltage-gated calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005245 | voltage-gated calcium channel activity | molecular_function |
| GO:0005246 | calcium channel regulator activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-100922-272 | Predicted to enable calcium channel regulator activity. Predicted to be involved in regulation of calcium ion transmembrane transport via high voltage-gated calcium channel. Predicted to act upstream of or within calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of L-type voltage-gated calcium channel complex. Human ortholog(s) of this gene implicated in aspirin-induced respiratory disease. Orthologous to human CACNG6 (calcium voltage-gated channel auxiliary subunit gamma 6). |
| ensembl_id | ENSDARG00000046079 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00019532 | True | 1415 | mRNA | 0.45 | 4 | 12836143 | 12866551 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_009762 | u2af2a | coding | upstream | 14375 | 12812214 ~ 12821768 (+) |
| XLOC_009761 | epn1 | coding | upstream | 79615 | 12730311 ~ 12756528 (+) |
| XLOC_009760 | aicda | coding | upstream | 170491 | 12660477 ~ 12665652 (+) |
| XLOC_009759 | nat14 | coding | upstream | 196390 | 12632428 ~ 12639753 (+) |
| XLOC_009758 | il11a | coding | upstream | 218988 | 12611362 ~ 12617155 (+) |
| XLOC_009764 | NA | coding | downstream | 96409 | 12962960 ~ 12963877 (+) |
| XLOC_009765 | NA | coding | downstream | 245713 | 13112264 ~ 13115609 (+) |
| XLOC_009766 | NA | coding | downstream | 302321 | 13168872 ~ 13172698 (+) |
| XLOC_009767 | pitpnc1b | coding | downstream | 557983 | 13424534 ~ 13453818 (+) |
| XLOC_009768 | NA | coding | downstream | 632810 | 13499361 ~ 13501965 (+) |
| XLOC_009756 | CR388102.6 | non-coding | upstream | 455297 | 12380730 ~ 12380846 (+) |
| XLOC_009755 | CR388102.1 | non-coding | upstream | 535857 | 12300169 ~ 12300286 (+) |
| XLOC_009751 | NA | non-coding | upstream | 696807 | 12117631 ~ 12139336 (+) |
| XLOC_009737 | NA | non-coding | upstream | 1252265 | 11580652 ~ 11583878 (+) |
| XLOC_009736 | NA | non-coding | upstream | 1257736 | 11573189 ~ 11578407 (+) |
| XLOC_009769 | NA | non-coding | downstream | 746103 | 13612654 ~ 13614188 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
