XLOC_009764


Basic Information

Item Value
gene id XLOC_009764
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 12962960 ~ 12963877 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021899
tttttttaAgcgtttaaatcattttaatttagtattttctcACCAAATATTTTAACATTCTCCAGAAAGGCAGTGAATCAAATCACAGCCCAAACACAACAGTGGCCTACACAATATTTACACAAGAAATATTCAATATTTCTAAACTCTCTTAAAGAAACCCTCTATCATTTCAAATCCAAACAATATGTTCAGCATTTAAAATGGGTTAATAAGTAATTCCCACTTTAGCATATGATGACAACACTAAAACTAACAATTCACAGATCCCATGATATAaactaaaatgcttttattaaatCATCTACAGAAGTCAAGGCAATAGTTACAGATCTCTTATTTGCTCTAAAGTGTACGTCTACATAAATGAATCGTCAGTTGTGTGTGATTGTCAAATGTTCTTTCGATCCAGTGCAGTTTAATATGCTACAAATTCACAACGACATTCAGTCTTAAAAAGAGGCCTTTGTTACAAACAGTATTTTACTTCCTTTCCTCATATAAAAAACTATATCTTGCCTTACACTgtagtttttgtttctttttatgtaCTATGCATCATCTCAATGAAAAACGAGTGCGCTATAAACTTTCTCTTTAGCATGGCGAGGCGCtcatgcgcatgtgtgtgtggtaGTGTGGCGGTGGCACAGCAGCGGGCGGAGCGGACATGGGCATGGCCTGTGATGCCGCAGCTGGGCCGTGCGCCCCGGGGTGGAGGGGGTGGTTGTGTGGGTATGGAGCGGCAGAACCTGGAGATGGCAGCTGGTATCCAGTTCCTGAGGCGGGACTGGAGGCGGCGGTGATTCCTGGAGAGGACGTGCCCTGCTGCCCACTGGCCTTGGATGGGTGCTGTGGGTTCTGGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021899 True 866 lncRNA 0.42 2 12962960 12963877

Neighbor

gene id symbol gene type direction distance location
XLOC_009763 cacng6b coding upstream 96409 12836143 ~ 12866551 (+)
XLOC_009762 u2af2a coding upstream 141192 12812214 ~ 12821768 (+)
XLOC_009761 epn1 coding upstream 206432 12730311 ~ 12756528 (+)
XLOC_009760 aicda coding upstream 297308 12660477 ~ 12665652 (+)
XLOC_009759 nat14 coding upstream 323207 12632428 ~ 12639753 (+)
XLOC_009765 NA coding downstream 148387 13112264 ~ 13115609 (+)
XLOC_009766 NA coding downstream 204995 13168872 ~ 13172698 (+)
XLOC_009767 pitpnc1b coding downstream 460657 13424534 ~ 13453818 (+)
XLOC_009768 NA coding downstream 535484 13499361 ~ 13501965 (+)
XLOC_009769 NA coding downstream 648777 13612654 ~ 13614188 (+)
XLOC_009756 CR388102.6 non-coding upstream 582114 12380730 ~ 12380846 (+)
XLOC_009755 CR388102.1 non-coding upstream 662674 12300169 ~ 12300286 (+)
XLOC_009751 NA non-coding upstream 823624 12117631 ~ 12139336 (+)
XLOC_009737 NA non-coding upstream 1379082 11580652 ~ 11583878 (+)
XLOC_009736 NA non-coding upstream 1384553 11573189 ~ 11578407 (+)
XLOC_009776 NA non-coding downstream 978196 13942073 ~ 13945576 (+)

Expression


Co-expression Network