XLOC_009765



Basic Information


Item Value
gene id XLOC_009765
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 13112264 ~ 13115609 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021688
CAGCTGCACAtatgaaaaacaaagaaagaaaaaagaaaaaaagaaagaaaatccaaATCAGCAAATACCTGTAAATATGGCAGTACCAGCTTCTtccacacctctctctctcttctttcaaTTCTTTTAGAGACTCTTGTTATTCTCCTCAATCAATTCGTTGGctcataaaaaagtaaaataaaaaggtgGCAACCTCACAGAACACAGGATCTACAAAGcggaaacctgaaaaaaaaaagaatctccaAAAAGGAAATCAAAGGAGGCAAGGAAGAAACAGCTGCTTTCCAGGAAAGACAGAAGAAGGAGGAGTGAACGGTCCTAAATTCCTTCATCCAATGGAGAGGATAGAGGGGAGCCCTATCATGTCTCATCTCGCCTACAGCAAAAAAAGTGAAGCAGAAATGCCCCTGGTGCCCCCTGAAAACAAATAGGTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021688 True 440 lncRNA 0.40 2 13112264 13115609

Neighbor


gene id symbol gene type direction distance location
XLOC_009764 NA coding upstream 148387 12962960 ~ 12963877 (+)
XLOC_009763 cacng6b coding upstream 245713 12836143 ~ 12866551 (+)
XLOC_009762 u2af2a coding upstream 290496 12812214 ~ 12821768 (+)
XLOC_009761 epn1 coding upstream 355736 12730311 ~ 12756528 (+)
XLOC_009760 aicda coding upstream 446612 12660477 ~ 12665652 (+)
XLOC_009766 NA coding downstream 53263 13168872 ~ 13172698 (+)
XLOC_009767 pitpnc1b coding downstream 308925 13424534 ~ 13453818 (+)
XLOC_009768 NA coding downstream 383752 13499361 ~ 13501965 (+)
XLOC_009769 NA coding downstream 497045 13612654 ~ 13614188 (+)
XLOC_009770 josd2 coding downstream 568198 13683807 ~ 13706770 (+)
XLOC_009756 CR388102.6 non-coding upstream 731418 12380730 ~ 12380846 (+)
XLOC_009755 CR388102.1 non-coding upstream 811978 12300169 ~ 12300286 (+)
XLOC_009751 NA non-coding upstream 972928 12117631 ~ 12139336 (+)
XLOC_009737 NA non-coding upstream 1528386 11580652 ~ 11583878 (+)
XLOC_009776 NA non-coding downstream 826464 13942073 ~ 13945576 (+)
XLOC_009777 NA non-coding downstream 834408 13950017 ~ 13954147 (+)

Expression



Co-expression Network