XLOC_009766


Basic Information

Item Value
gene id XLOC_009766
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 13168872 ~ 13172698 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021900
TTCAAACCCATTCCCAGGACATGATGTCATAACCAAACAAACTCTGATTGGTGGATGAATTCTGTCTGGACTGTACAGTACAAAGGCTGATGCAtttccacacacatacacacttgcattACCTTCAGTTACAGTGCAGTTTAcagcaaccaaaacaaaaaagagaaacaaatctgcaaaataacattgctttaaaacaaaataaacaggatAATTTCAAAGAAGTCAAGCAGTATTTCTTCTTTCTCCTTCTGTGTATATTTAGTCATGTGATTATGATTATAAAGTGACATGGAGGACCCTGTTTAAATATGAGTTTGATGAGATGCAAGGCGAGACACTGCAGGCATGCACCTGCATCTTTCATGCATCTTATGGGGTTTTAATAAAGTGtgtctaaaaataaaacacacatgcacacacacacatccaaaatacactttaaagtgtttctttggtcacactttattaatttatgtCTGTAGAAttgccataaaatatttttaattgcaaaaaaatgcaaattttaaaggcaattttcttaaaatattgaATTTTTCTCCTGCTCTGAGCCAGAAATCCCCACttgagcaacacacacacatacaccagacTTTTATATCTGTATTCACAAGATTTTTACAAAGGGATTTGCTCATACGTGCctgattatatacattttattttagaaaatttagaaaatgtacttatttttccAGCTCTTAGCAATATTTTCTTTGTAATTATGAAGTGATAAAAAGAGATTCCCAATATCCCATCTGTAAAAACCTTCAactatattatgtaaaaaaaaaaccactCATTTGAACCCAACTTCACCCAGCGTTCCTTTTTAAATGCTAGAAACATATGCAAATGAGTCATATTTAATGTAGCAATGCCCCATTTGCATATTTCATAAAACCTGCGATACGAAAAAAGTTCTGAATGCAAGAATTAATCTTTCATCCAGATAAGTAGAGTGCTAGCTATTAGCTAGTTTGTGTAGCCtcttcacctgcagtgtcttgcctgtGAGATGTAGGAACACATTCATACTGTGATCAAGCAACAGAGTGAATTCTCAGCCTTGAGTCTTAGATGTTATTGTTGGTGTGGAGCCTGTGGAATAAGGGGAGGCTAAGTAAAGCGTGTAGTGGTCTTTCACAGGGGCTGACCTGCtttcacacaacacacacacacacacaaacacaaacataccgATCTCTGCTCAGCTGTGATCAAGAGAGAAGAGCTGCACTTTTATCCGCAGAGCCGCCTGTCAACTAATGCCTCACATCATGGTGCCAGCAGATACCTGGAGCTACTCTAAATCTCCAGCTCCTGAGGGAAAGAGAAAGCAGGAGAAACTTCTAGAGGACCTGCAGGATCTCTGCTCTCCACCATGTGCGCCTGTCCTGAGTCACACGTCTAAACCGATGAGAGCAGTGGTGAAGCCTTTGGTGAGTGTTTTTTAGCAATGGGATGAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021900 True 1491 lncRNA 0.38 2 13168872 13172698

Neighbor

gene id symbol gene type direction distance location
XLOC_009765 NA coding upstream 53263 13112264 ~ 13115609 (+)
XLOC_009764 NA coding upstream 204995 12962960 ~ 12963877 (+)
XLOC_009763 cacng6b coding upstream 302321 12836143 ~ 12866551 (+)
XLOC_009762 u2af2a coding upstream 347104 12812214 ~ 12821768 (+)
XLOC_009761 epn1 coding upstream 412344 12730311 ~ 12756528 (+)
XLOC_009767 pitpnc1b coding downstream 251836 13424534 ~ 13453818 (+)
XLOC_009768 NA coding downstream 326663 13499361 ~ 13501965 (+)
XLOC_009769 NA coding downstream 439956 13612654 ~ 13614188 (+)
XLOC_009770 josd2 coding downstream 511109 13683807 ~ 13706770 (+)
XLOC_009771 flcn coding downstream 645802 13818500 ~ 13847335 (+)
XLOC_009756 CR388102.6 non-coding upstream 788026 12380730 ~ 12380846 (+)
XLOC_009755 CR388102.1 non-coding upstream 868586 12300169 ~ 12300286 (+)
XLOC_009751 NA non-coding upstream 1029536 12117631 ~ 12139336 (+)
XLOC_009776 NA non-coding downstream 769375 13942073 ~ 13945576 (+)
XLOC_009777 NA non-coding downstream 777319 13950017 ~ 13954147 (+)
XLOC_009782 NA non-coding downstream 981292 14153990 ~ 14158725 (+)

Expression


Co-expression Network