XLOC_009768



Basic Information


Item Value
gene id XLOC_009768
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 13499361 ~ 13501965 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021689
GTAAACCGCATTTATTAGGATCACTGAATAGTTAATCAGTTGGTGTGAATTAATATGATTGGTGTGAAGTTTCGAATCTGAAAGCAGACCTTTTCATAAGAGTTGCCTGATGTTTGGGTTTCATTTCTGCCCGCCAGCATCTTCAAAAGCATGTTTAACCATAACCATGATCTAGACAGAAAGGCAATCAAGgaaaaaaaagttaaataacggccattaaattataGAAACTTACCGtaacataac

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021689 True 246 lncRNA 0.35 2 13499361 13501965

Neighbor


gene id symbol gene type direction distance location
XLOC_009767 pitpnc1b coding upstream 45543 13424534 ~ 13453818 (+)
XLOC_009766 NA coding upstream 326663 13168872 ~ 13172698 (+)
XLOC_009765 NA coding upstream 383752 13112264 ~ 13115609 (+)
XLOC_009764 NA coding upstream 535484 12962960 ~ 12963877 (+)
XLOC_009763 cacng6b coding upstream 632810 12836143 ~ 12866551 (+)
XLOC_009769 NA coding downstream 110689 13612654 ~ 13614188 (+)
XLOC_009770 josd2 coding downstream 181842 13683807 ~ 13706770 (+)
XLOC_009771 flcn coding downstream 316535 13818500 ~ 13847335 (+)
XLOC_009772 zgc:174888 coding downstream 353074 13855039 ~ 13859164 (+)
XLOC_009773 grwd1 coding downstream 358334 13860299 ~ 13870899 (+)
XLOC_009756 CR388102.6 non-coding upstream 1118515 12380730 ~ 12380846 (+)
XLOC_009755 CR388102.1 non-coding upstream 1199075 12300169 ~ 12300286 (+)
XLOC_009776 NA non-coding downstream 440108 13942073 ~ 13945576 (+)
XLOC_009777 NA non-coding downstream 448052 13950017 ~ 13954147 (+)
XLOC_009782 NA non-coding downstream 652025 14153990 ~ 14158725 (+)
XLOC_009786 NA non-coding downstream 959297 14461262 ~ 14493478 (+)

Expression



Co-expression Network