XLOC_009769


Basic Information

Item Value
gene id XLOC_009769
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 13612654 ~ 13614188 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021901
CCAACGTCCGCCGGATTGACCGCTAGATGCTTGCGTGGTTCGATACTATTGTGCAGCCGTCAAATCAATCACATGACGATTCATAGTGGAAGCAAGCAGAAATACATTAATATCGACATGACTGTGTGTTCAGACATCACAGATATCAGCATGTAATGCAGTTCGTATCATAAAAGTAGACAAAGTTGTGAAGTCACGCAACACGAGACCGTGTTTACTTTAGAGACAGAGGAGGAGGAAAGACCTGCGCGCTCACGTGCAGCACCACAGCATCTGATCACAGATAGAAAATGTATAATTACCTTTATTTGAAAACagcctttttttaaacaaagagcGCCATTCTGCTTGCAGTTGATGGTAGATTAGACGAATGGACAGAAATATACATTCCTCGTATTCCCAGAAATTCTTGACAGTTTATGTTCTGCCGGAACTTTTGAAGAAAAATAGACAAATGTCCAGAATAACGACCTCCAAGCGCAACGTACAgacaataatttaacaaaatacagCGACTCAGGCGAAGAAACAGGAAGAATAAATGACTCCAAAACCGCAAATGATAACTTGACTGCTGGAACTCTTGAATGCGTCGCCTCGAAAAtgacaaatgaaaacaaaacgaAGTGTTGCTGAGTCAATTTCTGCTGCGTAGCGCGATTGGTGGGATGTTGACGTTTTTTTCCATGCAGTCGCTCAATCGCTTTTTTCCCTCTGTGGTCACCCCCTTCTGTTCAGTTCTCTCTGCATGTGTGTTGTCGCACGCTTTGAGCTTGAGCCGTCCGAGCTTTTCGCTCAGCTGGAACGAACACGGGCCGCTCACGTGACGTCACACCTCCCAGTCTAGAAGCGCGAACATGGCACTACTTGCACGGAGTTTTAATATTAATGAGGCACGCCCCCTCGTGACAGGCACGCTCCTCGGGGGTGGGTGGCACTGATTAAAAACAAATTGGTCGATAATTTCATTCCCAGCTGTCCTACGTTTGGCACTATGAAACAGCATTAACATGTGGCATTTATCGAGAACATTTTGAGAGTGGCCAGTTTTACAGAGCATCACAGATATGTTTATAATCTGTAATATAGACTGCTGATCTCACCTAACAAACGGTCGAGTTTTATCACTCAGAGAGCTACCTTTTGGGGGAAACCTACCAAGCGAGCGGGCACACTTTTTCACTTCACTGGTAATCCGCTGGAAACGTGAGCATCATGCGAGAGGAGATGGCAACTACACGTTGTGTCTCAGGAACACAGACGCGCTCTCCAGTGCACATGGTGTCCGCACGCGGAGACGCGGCTCAGCCTCGAGTGCTTAttgctgtgattggctgacagAAAACAGGCTCCTCCCGGCTCGGCCGGCCATTGGTTAGCATAATGCACGACGCTCCGCCCATTTAAACCACCCATGCTACAGCCGCGTGAGAATACAGAAACTGCGTGAATCCAGGCGGAGTGGCGCACACACCCACAAAACATTCAGAAATAAAGGAAACAGATTGGCTGTGGCTGAACCTGATGAACCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021901 True 1535 lncRNA 0.47 1 13612654 13614188

Neighbor

gene id symbol gene type direction distance location
XLOC_009768 NA coding upstream 110689 13499361 ~ 13501965 (+)
XLOC_009767 pitpnc1b coding upstream 158836 13424534 ~ 13453818 (+)
XLOC_009766 NA coding upstream 439956 13168872 ~ 13172698 (+)
XLOC_009765 NA coding upstream 497045 13112264 ~ 13115609 (+)
XLOC_009764 NA coding upstream 648777 12962960 ~ 12963877 (+)
XLOC_009770 josd2 coding downstream 69619 13683807 ~ 13706770 (+)
XLOC_009771 flcn coding downstream 204312 13818500 ~ 13847335 (+)
XLOC_009772 zgc:174888 coding downstream 240851 13855039 ~ 13859164 (+)
XLOC_009773 grwd1 coding downstream 246111 13860299 ~ 13870899 (+)
XLOC_009774 atg12 coding downstream 269684 13883872 ~ 13888705 (+)
XLOC_009756 CR388102.6 non-coding upstream 1231808 12380730 ~ 12380846 (+)
XLOC_009776 NA non-coding downstream 327885 13942073 ~ 13945576 (+)
XLOC_009777 NA non-coding downstream 335829 13950017 ~ 13954147 (+)
XLOC_009782 NA non-coding downstream 539802 14153990 ~ 14158725 (+)
XLOC_009786 NA non-coding downstream 847074 14461262 ~ 14493478 (+)
XLOC_009787 NA non-coding downstream 860668 14474856 ~ 14481801 (+)

Expression


Co-expression Network