XLOC_000977 (mxb)


Basic Information

Item Value
gene id XLOC_000977
gene name mxb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 7574351 ~ 7603734 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001545
CTGTGAACTCGCGGAGGAGATGCTGTAAGTTGTGTCAGGGATTGTTACACGATGCCCTCTTGAGCTCAAGATGATAAGGAGTAAAGAGGATGAGAAATGGCATGGGAGAATCAGTTACCAAAACCACGAGGAAGACTTTGATGACCCAGCGGAAGTGGAGAAAAAGATCCGTGAAGCCCAAGATGAGATGGCTGGAGCAGGTGTTGGTATCAGTGAAGAACTCATCAGTCTGCAGATCACCTCTGCCAATGTTCCTGACCTCACTCTCATTGACCTCCCTGGCATTGCGCGAGTGGCTGTCAAGGGTCAACCTGAGAACATTGGAGATCAGATTAAGAGACTGATCAGGATGTTCATTACCAAGCAGGAAACAATCAATCTGGTTGTGGTGCCATGCAATGTTGACATCGCCACCACAGAAGCATTGCAGATGGCTCAGGCAGAGGATCCCGAGGGCGAAAGGACTTTAGGCATCTTAACAAAGCCAGACCTGGTGGACAAGGGCACTGAAGGGACAGTTGTAGACATTGTCCACAATGAGGTCATTCACCTCACTAAAGGCTACATGATTGTAAGGTGCAGAGGGCAAAAAGAGATTATGGATCAGGTCACTCTAAATGAGGCTACAGAAACAGAGAGTGCCTTCTTCAAAGACCATCCTCATTTCAGGAAACTTTATGAAGAAGGTTTTGCTACTATTCCCAAGTTGGCAGAGAAACTAACAATTGAGTTGGTTCATCACATTCAGAGGTCCCTACCTCGTTTAGAAGAGCAAATCCAGACCAAGCTTGCTGAAACACAGAAGGAACTGGAAGCGTATGGTGATGGACCCCCGTCAGACCCTGCAGAAAGACTCAGCTTTTTCATTGATAAAGTTACAGCTTTTACATGTGACACTCTCAACCTGACGACTGGAGAGGAGGTTAAATCCGCATCAAAACTGCTGATTTTTCCAGAACTTCGACAGGAATTTGCCTATTGGAATAGCTTCTTAGACTCTTCAGGATATTCTTTCAAACTGAAGATTGAAGAAGAAGTTGATAACTATGAAGTGAAGTACCGGGGACGAGAACTCCCAGGTTTCATCAATTACAAGACCTTTGAGGGCCTTGTCAGGGAACAGATGAAGTTGTTGGAGGAACCTGCGTTAAAGATGCTGAAGAACGTCTCtgACATGGTTAAAAAGAAGTTCATCCAGTTGGCCCAGAGCAGCTTCACCGGTTTTCCTATTCTTCTAAAAATAGCAAAGACTAAGATCGAAGCCATCAAGCAGGATAAAGAGTGCTTGGCGGAATCCATGCTGAGGACTCAATTCAAGATGGAGCTCATAGTTTACACTCAAGATGGCACATACAGTCAGAGCCTACTTCGCTCAAAAGAAAAGCGGGAAGAGGACGAGGAAGACACAGAAAACTTTGACTGCATGACTGTAGGGATTGCCACAAGCAATCATGCTACTTTGAGTGAGATGAAGCTGCATCTCGAGTCCTACTACATGATTGCAAGCCAGCGTCTAGCTGATCAGATCCCAATGGTGATCCGCTATCTGCTGCTGCAAGAAGCCGCTTTGGAGCTGCAAAGGAGCATGCTGCAACTGCTGCAAGATAAAGACGGTGTAGACGACATGCTTAAAGAGGATTTTGACATTGGTCAAAAGCGGGAAAACTTACTGAGCCGCCAGAAACGTTTAATGAAAGCACAAAACCTCTTGGCTACCTATTAGGATTCTCTTCATAGTCAATTATAACTGTTTTAATGCTACAAATTATATATAGCTTGAAAAATGTAGCACATGGAACAAACGTGTAAACTTGCACGC
>TCONS_00001546
CCGCTTTACTTTGACTAGTCAGTCGGCGTTCGCCTCGGCGGCCATAAATTACAGTGTGGTGTGTTTGCCTCGGGTCCTGATGGTTTATTTCAACCCCGTTCCTTTATGACAGATCTGACAATGTGGCTGTGAGATCCTCGTGTGATTCTGCGTCCGAACTTCTGTGAACTCGCGGAGGAGATGCTGGATTGTTACACGATGCCCTCTTGAGCTCAAGATGATAAGGAGTAAAGAGGATGAGAAATGGCATGGGAGAATCAGTTACCAAAACCACGAGGAAGACTTTGATGACCCAGCGGAAGTGGAGAAAAAGATCCGTGAAGCCCAAGATGAGATGGCTGGAGCAGGTGTTGGTATCAGTGAAGAACTCATCAGTCTGCAGATCACCTCTGCCAATGTTCCTGACCTCACTCTCATTGACCTCCCTGGCATTGCGCGAGTGGCTGTCAAGGGTCAACCTGAGAACATTGGAGATCAGATTAAGAGACTGATCAGGATGTTCATTACCAAGCAGGAAACAATCAATCTGGTTGTGGTGCCATGCAATGTTGACATCGCCACCACAGAAGCATTGCAGATGGCTCAGGCAGAGGATCCCGAGGGCGAAAGGACTTTAGGCATCTTAACAAAGCCAGACCTGGTGGACAAGGGCACTGAAGGGACAGTTGTAGACATTGTCCACAATGAGGTCATTCACCTCACTAAAGGCTACATGATTGTAAGGTGCAGAGGGCAAAAAGAGATTATGGATCAGGTCACTCTAAATGAGGCTACAGAAACAGAGAGTGCCTTCTTCAAAGACCATCCTCATTTCAGGAAACTTTATGAAGAAGGTTTTGCTACTATTCCCAAGTTGGCAGAGAAACTAACAATTGAGTTGGTTCATCACATTCAGAGGTCCCTACCTCGTTTAGAAGAGCAAATCCAGACCAAGCTTGCTGAAACACAGAAGGAACTGGAAGCGTATGGTGATGGACCCCCGTCAGACCCTGCAGAAAGACTCAGCTTTTTCATTGATAAAGTTACAGCTTTTACATGTGACACTCTCAACCTGACGACTGGAGAGGAGGTTAAATCCGCATCAAAACTGCTGATTTTTCCAGAACTTCGACAGGAATTTGCCTATTGGAATAGCTTCTTAGACTCTTCAGGATATTCTTTCAAACTGAAGATTGAAGAAGAAGTTGATAACTATGAAGTGAAGTACCGGGGACGAGAACTCCCAGGTTTCATCAATTACAAGACCTTTGAGGGCCTTGTCAGGGAACAGATGAAGTTGTTGGAGGAACCTGCGTTAAAGATGCTGAAGAACGTCTCtgACATGGTTAAAAAGAAGTTCATCCAGTTGGCCCAGAGCAGCTTCACCGGTTTTCCTATTCTTCTAAAAATAGCAAAGACTAAGATCGAAGCCATCAAGCAGGATAAAGAGTGCTTGGCGGAATCCATGCTGAGGACTCAATTCAAGATGGAGCTCATAGTTTACACTCAAGATGGCACATACAGTCAGAGCCTACTTCGCTCAAAAGAAAAGCGGGAAGAGGACGAGGAAGACACAGAAAACTTTGACTGCATGACTGTAGGGATTGCCACAAGCAATCATGCTACTTTGAGTGAGATGAAGCTGCATCTCGAGTCCTACTACATGATTGCAAGCCAGCGTCTAGCTGATCAGATCCCAATGGTGATCCGCTATCTGCTGCTGCAAGAAGCCGCTTTGGAGCTGCAAAGGAGCATGCTGCAACTGCTGCAAGATAAAGACGGTGTAGACGACATGCTTAAAGAGGATTTTGACATTGGTCAAAAGCGGGAAAACTTACTGAGCCGCCAGAAACGTTTAATGAAAGCACAAAACCTCTTGGCTACCTATTAGGATTCTCTTCATAGTCAATTATAACTGTTTTAATGCTACAAATTATATATAGCTTGAAAAATGTAGCACATGGAACAAACGTGTAAACTTGCACGC
>TCONS_00001547
GAGGAAAGCTCAGCATCTGGTATTTTGTTGTGTTGTGAAAAGAagggtttatttttattaacatattgACATAGGACATTGATAATGGAGAAGATGAGTTACACGTTCAGTCAGCAATATGAGGAGAAAATTCGCCCTTGTATCGACACTATCGATAATTTACGGTCTCTGGGAGTCGAAAAGGACCTCGCGTTGCCTGCCATCGCCGTCATAGGAGACCAAAGCTCGGGAAAGAGTTCGGTTCTGGAGGCGCTGTCAGGAGTTCCGTTACCCAGGGGCAGTGGGATTGTTACACGATGCCCTCTTGAGCTCAAGATGATAAGGAGTAAAGAGGATGAGAAATGGCATGGGAGAATCAGTTACCAAAACCACGAGGAAGACTTTGATGACCCAGCGGAAGTGGAGAAAAAGATCCGTGAAGCCCAAGATGAGATGGCTGGAGCAGGTGTTGGTATCAGTGAAGAACTCATCAGTCTGCAGATCACCTCTGCCAATGTTCCTGACCTCACTCTCATTGACCTCCCTGGCATTGCGCGAGTGGCTGTCAAGGGTCAACCTGAGAACATTGGAGATCAGATTAAGAGACTGATCAGGATGTTCATTACCAAGCAGGAAACAATCAATCTGGTTGTGGTGCCATGCAATGTTGACATCGCCACCACAGAAGCATTGCAGATGGCTCAGGCAGAGGATCCCGAGGGCGAAAGGACTTTAGGCATCTTAACAAAGCCAGACCTGGTGGACAAGGGCACTGAAGGGACAGTTGTAGACATTGTCCACAATGAGGTCATTCACCTCACTAAAGGCTACATGATTGTAAGGTGCAGAGGGCAAAAAGAGATTATGGATCAGGTCACTCTAAATGAGGCTACAGAAACAGAGAGTGCCTTCTTCAAAGACCATCCTCATTTCAGGAAACTTTATGAAGAAGGTTTTGCTACTATTCCCAAGTTGGCAGAGAAACTAACAATTGAGTTGGTTCATCACATTCAGAGGTCCCTACCTCGTTTAGAAGAGCAAATCCAGACCAAGCTTGCTGAAACACAGAAGGAACTGGAAGCGTATGGTGATGGACCCCCGTCAGACCCTGCAGAAAGACTCAGCTTTTTCATTGATAAAGTTACAGCTTTTACATGTGACACTCTCAACCTGACGACTGGAGAGGAGGTTAAATCCGCATCAAAACTGCTGATTTTTCCAGAACTTCGACAGGAATTTGCCTATTGGAATAGCTTCTTAGACTCTTCAGGATATTCTTTCAAACTGAAGATTGAAGAAGAAGTTGATAACTATGAAGTGAAGTACCGGGGACGAGAACTCCCAGGTTTCATCAATTACAAGACCTTTGAGGGCCTTGTCAGGGAACAGATGAAGTTGTTGGAGGAACCTGCGTTAAAGATGCTGAAGAACGTCTCtgACATGGTTAAAAAGAAGTTCATCCAGTTGGCCCAGAGCAGCTTCACCGGTTTTCCTATTCTTCTAAAAATAGCAAAGACTAAGATCGAAGCCATCAAGCAGGATAAAGAGTGCTTGGCGGAATCCATGCTGAGGACTCAATTCAAGATGGAGCTCATAGTTTACACTCAAGATGGCACATACAGTCAGAGCCTACTTCGCTCAAAAGAAAAGCGGGAAGAGGACGAGGAAGACACAGAAAACTTTGACTGCATGACTGTAGGGATTGCCACAAGCAATCATGCTACTTTGAGTGAGATGAAGCTGCATCTCGAGTCCTACTACATGATTGCAAGCCAGCGTCTAGCTGATCAGATCCCAATGGTGATCCGCTATCTGCTGCTGCAAGAAGCCGCTTTGGAGCTGCAAAGGAGCATGCTGCAACTGCTGCAAGATAAAGACGGTGTAGACGACATGCTTAAAGAGGATTTTGACATTGGTCAAAAGCGGGAAAACTTACTGAGCCGCCAGAAACGTTTAATGAAAGCACAAAACCTCTTGGCTACCTATTAG
>TCONS_00001548
CTAAATGATAACTTTTTGTCCAGGGATTGTTACACGATGCCCTCTTGAGCTCAAGATGATAAGGAGTAAAGAGGATGAGAAATGGCATGGGAGAATCAGTTACCAAAACCACGAGGAAGACTTTGATGACCCAGCGGAAGTGGAGAAAAAGATCCGTGAAGCCCAAGATGAGATGGCTGGAGCAGGTGTTGGTATCAGTGAAGAACTCATCAGTCTGCAGATCACCTCTGCCAATGTTCCTGACCTCACTCTCATTGACCTCCCTGGCATTGCGCGAGTGGCTGTCAAGGGTCAACCTGAGAACATTGGAGATCAGGTAAA

Function

symbol description
mxb Predicted to enable GTPase activity and microtubule binding activity. Acts upstream of or within response to virus. Predicted to be active in several cellular components, including cytoplasm; microtubule; and nucleus. Is expressed in head kidney. Human ortholog(s) of this gene implicated in alopecia areata; avian influenza; liver disease; and prostate cancer. Orthologous to human MX1 (MX dynamin like GTPase 1) and MX2 (MX dynamin like GTPase 2).

GO:

id name namespace
GO:0003374 dynamin family protein polymerization involved in mitochondrial fission biological_process
GO:0098884 postsynaptic neurotransmitter receptor internalization biological_process
GO:0009615 response to virus biological_process
GO:0016185 synaptic vesicle budding from presynaptic endocytic zone membrane biological_process
GO:0048285 organelle fission biological_process
GO:0031623 receptor internalization biological_process
GO:0061025 membrane fusion biological_process
GO:0050803 regulation of synapse structure or activity biological_process
GO:0000266 mitochondrial fission biological_process
GO:0098844 postsynaptic endocytic zone membrane cellular_component
GO:0030424 axon cellular_component
GO:0045202 synapse cellular_component
GO:0005886 plasma membrane cellular_component
GO:0015630 microtubule cytoskeleton cellular_component
GO:0045211 postsynaptic membrane cellular_component
GO:0005634 nucleus cellular_component
GO:0031410 cytoplasmic vesicle cellular_component
GO:0031966 mitochondrial membrane cellular_component
GO:0014069 postsynaptic density cellular_component
GO:0043197 dendritic spine cellular_component
GO:0044327 dendritic spine head cellular_component
GO:0016020 membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0008017 microtubule binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030721-6 Predicted to enable GTPase activity and microtubule binding activity. Acts upstream of or within response to virus. Predicted to be active in several cellular components, including cytoplasm; microtubule; and nucleus. Is expressed in head kidney. Human ortholog(s) of this gene implicated in alopecia areata; avian influenza; liver disease; and prostate cancer. Orthologous to human MX1 (MX dynamin like GTPase 1) and MX2 (MX dynamin like GTPase 2).

Ensembl:

ensembl_id ENSDARG00000004953

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001545 False 1819 processed_transcript 0.45 12 7574351 7603573
TCONS_00001546 False 1966 mRNA 0.45 12 7574351 7603734
TCONS_00001547 False 1968 mRNA 0.46 12 7574447 7582859
TCONS_00001548 True 321 lncRNA 0.47 2 7581169 7581987

Neighbor

gene id symbol gene type direction distance location
XLOC_000976 mxa coding downstream 4170 7562316 ~ 7570181 (-)
XLOC_000975 NA coding downstream 20012 7545049 ~ 7554339 (-)
XLOC_000974 CABZ01075316.1 coding downstream 432208 7142039 ~ 7142143 (-)
XLOC_000972 klf7a coding downstream 1079967 6403551 ~ 6494384 (-)
XLOC_000973 CU571320.1 coding downstream 1120832 6453404 ~ 6453519 (-)
XLOC_000978 efnb2b coding upstream 28385 7632119 ~ 7659870 (-)
XLOC_000979 arglu1b coding upstream 58357 7662091 ~ 7673376 (-)
XLOC_000980 NA coding upstream 96289 7700023 ~ 7701856 (-)
XLOC_000981 BX908756.3 coding upstream 167823 7771557 ~ 7844362 (-)
XLOC_000982 BX908756.2 coding upstream 197797 7801531 ~ 7801646 (-)
XLOC_000971 NA non-coding downstream 1174025 6398199 ~ 6400326 (-)
XLOC_000969 NA non-coding downstream 1400650 6159631 ~ 6173701 (-)
XLOC_000985 CR855320.6 non-coding upstream 316385 7920119 ~ 7920206 (-)
XLOC_000996 NA non-coding upstream 598656 8202390 ~ 8205228 (-)

Expression


Co-expression Network