XLOC_009786


Basic Information

Item Value
gene id XLOC_009786
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 14461262 ~ 14493478 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021691
ATTCCATTGACAGCTTTTTCAAAAATGGCTATTTGTACAGTCCTGTAACAGGTCTTCAACCCTATTGAATtacaataaaacacacctgaagcagctgatTGATCTTTGCAGCGTTGTTATAAAAGGGTCTGAATGGAAATAAGGTCGgcaataaaatttaaatgagACTGGACATGCTGGACAAGGGCCAAAATCCTCTGCAGTATATGCTGATGTGATAACTACAGTTATCTACTTCCTTGCATATTCAGtgtcttttttatatatgtatattttgtgATACCAATAGCTGTCTGTGCATATATAAGTGAAACACACCAGGTCACAAATCAACTTGTGAAAGCTCCAGCAAGGATCGAGTTGACCGGACACAAATACGGCGGTTCTCACTATGATTCCAAAAACGCTGTTATTCATGGTCCTCTTGACCCTTGAATTGAACACTTGTCTGAGTCAGCCCTGCGAAGAAACCCAGAACCAGAATCGCTACGATACTTTCCTTCACCGTCACCTTCATAACAATATACCGCAGACAAAAGATGACATGAGTGCATGGCAGAAGTTTGTTGACAAAATTGACACATGGGACAGGGGAGttcaatcattttttttcccCAGTGAAGCGAACAATGTAATCGCTGTCTGTTCAACAGGAGGCAAAAAACATCAAGGCAACCTCTGCATCAGCAAGAAGCCTCTGTCGTACTTCACTGTTAAGGTCAACGAGAAGAAGCAGGTCAAAAAAGTCAAACCTTTTCTTGACCATCATGTTATTCTTGCCTGTGAAACATTTCGAAGTGAAAACAAATGTCTACCAGTTCATTTTGaggcaaatgtaaataatgttaaacCAGACAATAACAAAGAAGACTGCAGTTAAAGCAATGGTAGATACATGTTTTATGCTTTTTGAGGATCTGTAGACACATGGCCTCCAAATCTGTGATGTTCGCTTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021691 True 957 lncRNA 0.40 2 14461262 14493478

Neighbor

gene id symbol gene type direction distance location
XLOC_009785 polr3c coding upstream 180662 14249546 ~ 14280600 (+)
XLOC_009784 gba coding upstream 229950 14216581 ~ 14231312 (+)
XLOC_009783 dap3 coding upstream 245645 14201401 ~ 14215617 (+)
XLOC_009782 NA coding upstream 302537 14153990 ~ 14158725 (+)
XLOC_009781 si:dkey-85k15.11 coding upstream 369417 14078748 ~ 14091845 (+)
XLOC_009790 deptor coding downstream 94663 14588141 ~ 14675907 (+)
XLOC_009791 NA coding downstream 129046 14622524 ~ 14622765 (+)
XLOC_009792 NA coding downstream 144567 14638045 ~ 14638290 (+)
XLOC_009793 NA coding downstream 147521 14640999 ~ 14641398 (+)
XLOC_009794 col14a1a coding downstream 191438 14684916 ~ 15050842 (+)
XLOC_009777 NA non-coding upstream 507115 13950017 ~ 13954147 (+)
XLOC_009776 NA non-coding upstream 515686 13942073 ~ 13945576 (+)
XLOC_009769 NA non-coding upstream 847074 13612654 ~ 13614188 (+)
XLOC_009768 NA non-coding upstream 959297 13499361 ~ 13501965 (+)
XLOC_009795 NA non-coding downstream 404493 14897971 ~ 14898281 (+)
XLOC_009797 NA non-coding downstream 838384 15331862 ~ 15332147 (+)

Expression


Co-expression Network