CI01000053_00379771_00382260


Basic Information

Item Value
gene id CI01000053_00379771_00382260
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 379621 ~ 382260 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000053_00379771_00382260.mRNA
ATGCCTGCATGCAGACAAACACACACGCTGGTGGAGAGTGAAGTAAAAAGGGGCGGGACATTCTCAGCCCAACCCACCAGTGTGTATTACACTCTGATTGGTTTGTTCCAGGTGCTGAGTCTTCCACGTCTAGCCTCCCGGGCGTTTAGCACAACAGTCCGGCAAATGAAAAACAAGGTGCCGGATAGACAGAAGGTTTTCCTGGAGGATAACGGTCTGCCTGTCCACATTAAAGGAGGCACTACCGACGTCCTTCTGTACCGGTTGACCATGACCATCACATTAGCAGGCACTGCCTTTTCCTGTTACTGGTTGCTGTTGGCCTCTATGCCCAAGAGTAAAGCATAAGAACTTTAAAGCTGCATGATGCTGTACAAATCCATTTCATTTCAAATACCTTGAACAATAAA

Function

NR:

description
Cytochrome c oxidase polypeptide VIIa-liver/heart, mitochondrial precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000053_00379771_00382260.mRNA False 410 mRNA 0.48 4 379709 382260

Neighbor

gene id symbol gene type direction distance location
CI01000053_00292771_00295073 TNFAIP1 coding downstream 84636 291914 ~ 295073 (-)
CI01000053_00236043_00262938 SGSM2 coding downstream 116145 235840 ~ 263564 (-)
CI01000053_00116887_00128931 NA coding downstream 249980 116666 ~ 129729 (-)
CI01000053_00094748_00113755 ULK2 coding downstream 265954 94497 ~ 113755 (-)
CI01000053_00390989_00410148 SUPT5H coding upstream 8539 390799 ~ 410148 (-)
CI01000053_00432322_00449797 NA coding upstream 50009 432269 ~ 449797 (-)
CI01000053_00454429_00457235 NA coding upstream 72152 454412 ~ 457235 (-)
CI01000053_00496924_00507195 NA coding upstream 114463 496723 ~ 507195 (-)
CI01000053_00629840_00639156 NA coding upstream 247453 629713 ~ 639171 (-)
G225467 NA non-coding downstream 98750 272956 ~ 280959 (-)
G225534 NA non-coding downstream 149241 230259 ~ 230468 (-)
G225466 NA non-coding downstream 196113 160717 ~ 183596 (-)
G225505 NA non-coding downstream 224051 155251 ~ 155658 (-)
G225604 NA non-coding upstream 108663 490923 ~ 491132 (-)
G225606 NA non-coding upstream 110793 493053 ~ 493289 (-)
G225571 NA non-coding upstream 142234 524494 ~ 525945 (-)
G225570 NA non-coding upstream 143857 526117 ~ 527530 (-)
G225620 NA non-coding upstream 170216 552476 ~ 556059 (-)
G225574 NA other upstream 161387 543647 ~ 546868 (-)
G225812 NA other upstream 1077335 1459595 ~ 1466732 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other upstream 1835188 2225210 ~ 2226481 (-)
G226826 NA other upstream 2183632 2565892 ~ 2567072 (-)
G226963 NA other upstream 2614457 2996717 ~ 2997268 (-)

Expression


Co-expression Network