XLOC_009788 (BX324006.1)



Basic Information


Item Value
gene id XLOC_009788
gene name BX324006.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 14479160 ~ 14484367 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00019571
agtaaatatagtgtgaactaaacaaaatgtgtaatacagaaacattaacactttcagttaaatttgattaaaatcagTTGGGGTAAGCAGATAtcctgataattattattattatttttttatcataaccAGGTCTAGAtcccaaaacaataaaaaaacgaaaacatatataaaattttgtcttttatttatttatttattttcacaatcaatttttatcaaaatttgttccaatcaaactttatttaaccaaattttaaatacgttttttttttatttgatcatatttttgcattaattatttcattattagattctataaaacaaaattacactgtaaataaaataattgtggacACTGACAATTAAATATTGACTCAACAAATGACTTCACAATAATAAgccccaaacaaaaaaaaatacacattattaATTTCAGATGATGGTctgaagt

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105421

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00019571 True 454 lncRNA 0.22 2 14479160 14484367

Neighbor


gene id symbol gene type direction distance location
XLOC_009785 polr3c coding upstream 198560 14249546 ~ 14280600 (+)
XLOC_009784 gba coding upstream 247848 14216581 ~ 14231312 (+)
XLOC_009783 dap3 coding upstream 263543 14201401 ~ 14215617 (+)
XLOC_009782 NA coding upstream 320435 14153990 ~ 14158725 (+)
XLOC_009781 si:dkey-85k15.11 coding upstream 387315 14078748 ~ 14091845 (+)
XLOC_009790 deptor coding downstream 103774 14588141 ~ 14675907 (+)
XLOC_009791 NA coding downstream 138157 14622524 ~ 14622765 (+)
XLOC_009792 NA coding downstream 153678 14638045 ~ 14638290 (+)
XLOC_009793 NA coding downstream 156632 14640999 ~ 14641398 (+)
XLOC_009794 col14a1a coding downstream 200549 14684916 ~ 15050842 (+)
XLOC_009777 NA non-coding upstream 525013 13950017 ~ 13954147 (+)
XLOC_009776 NA non-coding upstream 533584 13942073 ~ 13945576 (+)
XLOC_009769 NA non-coding upstream 864972 13612654 ~ 13614188 (+)
XLOC_009768 NA non-coding upstream 977195 13499361 ~ 13501965 (+)
XLOC_009795 NA non-coding downstream 413604 14897971 ~ 14898281 (+)
XLOC_009797 NA non-coding downstream 847495 15331862 ~ 15332147 (+)

Expression



Co-expression Network