XLOC_009790 (deptor)


Basic Information

Item Value
gene id XLOC_009790
gene name deptor
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 14588141 ~ 14675907 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019574
CAGTAACGTGCTTTCAGTGAAGAATAGTAAACAATCCACAATGCCATGAAGAAAATACATCATCTGGGGTCTTTGTTCAGGAATAATCTTTAGTTTGAATCCTCGACGTGATTTATTGCACGATTTTGGGGTTCATTTTGCACACGACGGGATATAGGCTACTGTTGGCTGAACTGAGGGCACTTGatggcacacaaaaaaacaagttATTCCGAGTCGTTTTGCGCTGTGATCAAGATTACAGTGATGTTCTTTTATTGACACCGCTGGTATTGTTCTGCGAAGCATAAGACTGAGGTTTCTGCATCGGAACCAAGtgttttttttcatTCAGGCGTTGAATAATCACATCAGAGTGCATGATTTGGTATTCAGCGCGGCTGTCAGAGATGGACGGCATCGGGAACACCATGCAGAAGAAGGCTGCTGAGCTGGAGCGCATGGCCGAAGTCCTCGTTACCGGAGAACAGTTACGGCTGCGACTGCACGAAGCAAGAATGATTAAAGACAGAAGGCACCATCTCCGCACGTACCCCAACTGCTTTTTGGGCAAGGAGAttattgattggctgattgagcACAAGGAGGCAACTGACAGAGATACTGCCATCAAGATCATGCAGAAACTTCTTGACCACAGCATAATTCACCATGTTTGCGATGACCACAAGGAGTTCAAAGATATGAAGCTCTTCTTCCGTTTCAGGAAAGATGACGGCACTTTTGCACTGGACAGTGAAGCCAAAGTGTTCATGAGAGGTCAACGGATATATGAGAAGTTGATGAACACTGAAAACAATCTGCTGCAGACACGTGCAGAGGAGGGTGTGATGTATGAGCGGACGCTGGTGGCCTCAGAGTTTATAGACTGGCTCCTGCAGGAAGGAGAAATGCCCTACAGGGATGAGTCAGAGCAGCTGGGACGCAGACTGCTGGAGCATGGCATCATTCAACATGTTTCTAACAAGCACCATTTTGTGGATGGTGGCCTGCTTTACCAGTTCAGGATGAATTTCCGGCGAAGGCGGCGGCTGATAGAGCTGTTGAACGAGCGCTGCCGCAGCATCCCGGAGAACCACGACAGCCCTTTTTGTCTGCGCAAACAGGGTTCTGAAgggggaaacaccagcttcctcTCAGTAAGCCCCACTAAAGAGATAAAGGTGGTGTCGGCGGTGCGGCGGAGCAGCATGAGCAGTAGCTGTGGTAGCAGCGGATACTACAGCAGCAGCCCCACACTCAGCAGCAGCCCGCCTGTTCTCTGCAACCCCAAATCAGTGCTGAAGAGGCAAGTGAGTCCAGAGGAACTTCAGACTCCTGGTGGACCTTACATAAAGAAGACATTCACAATTGTGGGAGATGCAGTGGGCTGGGGCTTTGTGGTGAGGGGAAGTAAACCCTGTCACATTCAGGCCGTGGACCCTGGTGGACCCGCGGCAGCAGCAGGAATGAAGGTGTGTCAGTTTGTGGTTGCAGTCAATGGATTGAATGTGCTGAATCAGGATTACAGGACCGTCAGCAGCATCATTCTCACCGGCCCCAGAACAGTTGTCATGGAGGTTATGGAGGAAGGGGAATATTGAAGACGAGCTCTTCTGTGGTTTCTGTTATTCTCTGActctttctctttttcctttAGCTGAACTTTTCTCAGCGAGTGAACATTTCTGAGAAGTGAAACCTTGATTCTGTTCATCATTTCAATTCGAACTGTTAGCTTAAAGAGCATGACACTAATCCATGCTTTAAAATCCGTGCCTCCTATTGGCTCCCCATTGACTGTTACCGCTCCATGTCAGCTGAGACTGTAACTGGACAGATTTTATGGGAAAAGCAGCtgccaaaaaaaattttttagcaGAACTGTAGCATTTAAAACACTCATAGTAGGTTTGCAGGACAGATGCCAAACTAATATATTTGTCTGCCATTCAGGTAAGAGCacaattcagtgtttttttttctcgacTGTTTCTTCATTTAGAGTTCATGCTGTGACTTTTGGAGAGTAAAGGAAAA
>TCONS_00019575
GTGCTTTCAGTGAAGAATAGTAAACAATCCACAATGCCATGAAGAAAATACATCATCTGGGGTCTTTGTTCAGGAATAATCTTTAGTTTGAATCCTCGACGTGATTTATTGCACGATTTTGGGGTTCATTTTGCACACGACGGGATATAGGCTACTGTTGGCTGAACTGAGGGCACTTGatggcacacaaaaaaacaagttATTCCGAGTCGTTTTGCGCTGTGATCAAGATTACAGTGATGTTCTTTTATTGACACCGCTGGTATTGTTCTGCGAAGCATAAGACTGAGGTTTCTGCATCGGAACCAAGGCGTTGAATAATCACATCAGAGTGCATGATTTGGTATTCAGCGCGGCTGTCAGAGATGGACGGCATCGGGAACACCATGCAGAAGAAGGCTGCTGAGCTGGAGCGCATGGCCGAAGTCCTCGTTACCGGAGAACAGTTACGGCTGCGACTGCACGAAGCAAGAATGATTAAAGACAGAAGGCACCATCTCCGCACGTACCCCAACTGCTTTTTGGGCAAGGAGAttattgattggctgattgagcACAAGGAGGCAACTGACAGAGATACTGCCATCAAGATCATGCAGAAACTTCTTGACCACAGCATAATTCACCATGTTTGCGATGACCACAAGGAGTTCAAAGATATGAAGCTCTTCTTCCGTTTCAGGAAAGATGACGGCACTTTTGCACTGGACAGTGAAGCCAAAGTGTTCATGAGAGGTCAACGGATATATGAGAAGTTGATGAACACTGAAAACAATCTGCTGCAGACACGTGCAGAGGAGGGTGTGATGTATGAGCGGACGCTGGTGGCCTCAGAGTTTATAGACTGGCTCCTGCAGGAAGGAGAAATGCCCTACAGGGATGAGTCAGAGCAGCTGGGACGCAGACTGCTGGAGCATGGCATCATTCAACATGTTTCTAACAAGCACCATTTTGTGGATGGTGGCCTGCTTTACCAGTTCAGGATGAATTTCCGGCGAAGGCGGCGGCTGATAGAGCTGTTGAACGAGCGCTGCCGCAGCATCCCGGAGAACCACGACAGCCCTTTTTGTCTGCGCAAACAGGGTTCTGAAgggggaaacaccagcttcctcTCAGTAAGCCCCACTAAAGAGATAAAGGTGGTGTCGGCGGTGCGGCGGAGCAGCATGAGCAGTAGCTGTGGTAGCAGCGGATACTACAGCAGCAGCCCCACACTCAGCAGCAGCCCGCCTGTTCTCTGCAACCCCAAATCAGTGCTGAAGAGGCAAGTGAGTCCAGAGGAACTTCAGACTCCTGGTGGACCTTACATAAAGAAGACATTCACAATTGTGGGAGATGCAGTGGGCTGGGGCTTTGTGGTGAGGGGAAGTAAACCCTGTCACATTCAGGCCGTGGACCCTGGTGGACCCGCGGCAGCAGCAGCCATGAATTGAACTCACTGGGACACCTAAAACAACATCACACAAAATGTTGGAGTACAGCATGTACAATAGTGTCTGCTTTCTAGTACTTGTGTGAAGTATTTTTTTAGCCTTTTAACTGGAGAACTTTAAATACTGccaggaaaaaatatataatttaggaTAGTCATAGAAAAGTAGTGTCTATGGATTCATTTGCCAATTGCGTAACTAGTTTAAGAAGtatatctttaatattatataaaaaaaatcattagagtAATCGTAAACATACAATAGATATGTTTGTGCAAATAAATCCCCACGCATGTGAATTACGAagcagtcagtcattcattcaggaGTGAAGACATCCCTTGTAAAAGAAAATGAACCAGGGTTTATTAGAGTAAAAGTTTAGTGACCATGGTTTTGTGACCATATCATGATTAAACTATGGTTAGTGTTGCAAAAACATGGTTTATTTGTGGTTATCATAGTTTAACTACAATAACCGTGGCTTTTTCTTTTATAGCAAAACTGGTTCATATTTGTAAGGGATGTCATGACATGCCATCTTTTCTATGCTCATAAACGAATATTGCATTTGTGGGAGTTTTATTGTAGTGAAATTGTACTAATTTGTGTTGatgaaaacaacaataacagtCACAGgaagattttatttgtttttgtatgaaGTAAGCTCAAATATTCTGCCTTAATGACCATGATTGTGCTGCTAATTCTCACGGCTGGTCACGTACCCTTACAAAAAATATTCTagtaaaatatggtaaaaaaatattatagtaaaagtAATAGTTTGTTTTTTCCCTGGCAGATTGAATACAATTTATATAACTACATTTTACTACAGTTACAATGGTTTAACTACAGTATATATGTATAGTAAAACCATGACTAATTTTCATTATGTAACGTCTCTAATTATACAAAAGAAATCACGTCTGTTTGAAGACTTTAAAGATCGTGGAAGTGATCATGACAATCAGCATCAGGGTAGTCTGTTAAATACAGGTCCAGACATGTGCCACATATTCTGTAAACTAATCCAATGATCTTGTCCTAGAAGAGAAATAGAAGAGTTTCATTCAAAACTTCAATGCACATGTGTCCGTTTAAAGAGGAATGGTACATTACAGCCTATTTGTATTTCTCTGTGCAGCTCAAATCATGATTAATGTGTgtttgattcatgttttaataaacACCTTGATTTCATTT
>TCONS_00019576
TGCTTTCAGTGAAGAATAGTAAACAATCCACAATGCCATGAAGAAAATACATCATCTGGGGTCTTTGTTCAGGAATAATCTTTAGTTTGAATCCTCGACGTGATTTATTGCACGATTTTGGGGTTCATTTTGCACACGACGGGATATAGGCTACTGTTGGCTGAACTGAGGGCACTTGatggcacacaaaaaaacaagttATTCCGAGTCGTTTTGCGCTGTGATCAAGATTACAGTGATGTTCTTTTATTGACACCGCTGGTATTGTTCTGCGAAGCATAAGACTGAGGTTTCTGCATCGGAACCAAGGCGTTGAATAATCACATCAGAGTGCATGATTTGGTATTCAGCGCGGCTGTCAGAGATGGACGGCATCGGGAACACCATGCAGAAGAAGGCTGCTGAGCTGGAGCGCATGGCCGAAGTCCTCGTTACCGGAGAACAGTTACGGCTGCGACTGCACGAAGCAAGAATGATTAAAGACAGAAGGCACCATCTCCGCACGTACCCCAACTGCTTTTTGGGCAAGGAGAttattgattggctgattgagcACAAGGAGGCAACTGACAGAGATACTGCCATCAAGATCATGCAGAAACTTCTTGACCACAGCATAATTCACCATGTTTGCGATGACCACAAGGAGTTCAAAGATATGAAGCTCTTCTTCCGTTTC

Function

symbol description
deptor Predicted to act upstream of or within intracellular signal transduction; negative regulation of TOR signaling; and negative regulation of protein kinase activity. Orthologous to human DEPTOR (DEP domain containing MTOR interacting protein).

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0006469 negative regulation of protein kinase activity biological_process
GO:0032007 negative regulation of TOR signaling biological_process

KEGG:

id description
ko04150 mTOR signaling pathway
ko04140 Autophagy - animal
ko04131 Membrane trafficking

ZFIN:

id description
ZDB-GENE-061013-453 Predicted to act upstream of or within intracellular signal transduction; negative regulation of TOR signaling; and negative regulation of protein kinase activity. Orthologous to human DEPTOR (DEP domain containing MTOR interacting protein).

Ensembl:

ensembl_id ENSDARG00000040930

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019574 False 2019 mRNA 0.47 10 14588141 14671268
TCONS_00019575 False 2648 mRNA 0.42 10 14588148 14675907
TCONS_00019576 True 679 mRNA 0.46 4 14588149 14602419

Neighbor

gene id symbol gene type direction distance location
XLOC_009789 BX005402.1 coding upstream 79941 14479551 ~ 14508200 (+)
XLOC_009786 NA coding upstream 94663 14461262 ~ 14493478 (+)
XLOC_009788 BX324006.1 coding upstream 103774 14479160 ~ 14484367 (+)
XLOC_009787 NA coding upstream 106340 14474856 ~ 14481801 (+)
XLOC_009785 polr3c coding upstream 307541 14249546 ~ 14280600 (+)
XLOC_009794 col14a1a coding downstream 9009 14684916 ~ 15050842 (+)
XLOC_009795 NA coding downstream 222064 14897971 ~ 14898281 (+)
XLOC_009796 mtbp coding downstream 421856 15097763 ~ 15147228 (+)
XLOC_009797 NA coding downstream 655955 15331862 ~ 15332147 (+)
XLOC_009798 NA coding downstream 693785 15369692 ~ 15371261 (+)
XLOC_009782 NA non-coding upstream 429416 14153990 ~ 14158725 (+)
XLOC_009799 CT573793.1 non-coding downstream 1033504 15709411 ~ 15710083 (+)
XLOC_009800 CT573799.1 non-coding downstream 1190317 15866224 ~ 15867165 (+)

Expression


Co-expression Network