CI01000053_01649924_01653347


Basic Information

Item Value
gene id CI01000053_01649924_01653347
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 1649924 ~ 1654260 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000053_01649924_01653347.mRNA
AGCACTCCACTGGATTTGATCGAGACTGGGAAAGCACTGAAGTTCCAAGCAGAGCGCCCCCATTTGGTCAGTTTAGGAAGTGGCCGTCTCAGTACAGCTATCACCCTTTTACCCCTGCCTGAAGGGAAGACCACTCTGGGTCATGGAGCCATGGACATCAACATCCAGGGCCCAGGGATCGCAGCTCAGCATTGCTTTATCGAGAACAGGGCTGGAGTCATCACACTGCACCCCTGTGGAAACCAGTGTAGCATGGATGGACTACCGGTCACCAAGCCTGTGCGCCTGTCTCAAGGGAAATTAGTTACACCAGTGACGGAGACAGCTGTTCAACTTTACCACCCATCAATGCGTGCAGGGGTTCAGAGACTTCAGAAGTGCTTGGATACAGTACAGCACCTCTGGGTTGCCATTCGGTGGACAGGATTATATTTCTGTGACTGGAGATATATGGTTTATAGCGGAAGCCTCCTCACTACGACTGCGTACACTGGACATCTATTTGCACTGTTTCAAGTTAACGATAAAGAAATCTGATAAAAGCATGGGGAATAATTGATGAATACTTCATGAACAAAGGATTTCCCGCGACAAAGCAAGTCAGTCTCTGCATGCTACAGCTGTAGTGTAAAGCCATGTGCTTTCCTATTTAAAGGGACAGATAGGATGTTACCTACAGATGGGACGGGAAGTTGACCGTTTGGATTTAAAAGTAAGTGAATGAAGACCTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000053_01649924_01653347.mRNA False 731 mRNA 0.48 3 1649924 1653541

Neighbor

gene id symbol gene type direction distance location
CI01000053_01622562_01627092 ARCN1B, ARCN1 coding upstream 22322 1622562 ~ 1627602 (+)
CI01000053_01615318_01617274 CRYABA coding upstream 32282 1615247 ~ 1617642 (+)
CI01000053_01599993_01601981 PIH1D2 coding upstream 47331 1599993 ~ 1602593 (+)
CI01000053_01589610_01599104 TMPRSS5 coding upstream 50585 1589610 ~ 1599339 (+)
CI01000053_01574104_01586674 NA coding upstream 63250 1574104 ~ 1586674 (+)
CI01000053_01663005_01713138 PHLDB1 coding downstream 7498 1661039 ~ 1713197 (+)
CI01000053_01751833_01753354 ATF5B coding downstream 98292 1751833 ~ 1753451 (+)
CI01000053_01790197_01796045 POU2AF1 coding downstream 135648 1789189 ~ 1797457 (+)
CI01000053_01860130_01870321 NA coding downstream 206429 1859970 ~ 1870436 (+)
CI01000053_01972623_01978167 TUBD1 coding downstream 319082 1972623 ~ 1978639 (+)
G225889 NA non-coding upstream 43670 1602599 ~ 1606254 (+)
G225885 NA non-coding upstream 104805 1544851 ~ 1545119 (+)
G225801 NA non-coding upstream 107029 1542563 ~ 1542895 (+)
G225796 NA non-coding upstream 117727 1531757 ~ 1532197 (+)
G225777 NA non-coding upstream 171226 1473456 ~ 1478698 (+)
G225915 NA non-coding downstream 103204 1756745 ~ 1760172 (+)
G225916 NA non-coding downstream 110752 1764293 ~ 1766328 (+)
G225917 NA non-coding downstream 113515 1767056 ~ 1767290 (+)
G225921 NA non-coding downstream 117827 1771368 ~ 1771634 (+)
G225925 NA non-coding downstream 125654 1779195 ~ 1779394 (+)
G225952 NA other downstream 219333 1872874 ~ 1873295 (+)
CI01000053_02594164_02594541 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, BRAFLDRAFT_114344, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other downstream 939686 2592558 ~ 2595467 (+)
G226292 NA other downstream 1383061 3036602 ~ 3046783 (+)
G226347 NA other downstream 1618833 3272374 ~ 3274911 (+)
G226399 NA other downstream 1967257 3620798 ~ 3697529 (+)

Expression


Co-expression Network