CI01000053_02739707_02746533


Basic Information

Item Value
gene id CI01000053_02739707_02746533
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 2739494 ~ 2746582 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000053_02739707_02746533.mRNA
AAAGAGGAGGGAGGTTGTATATTTTTCTTGTTCAGACATCATCAACAGTATGGATCGTCTGGCGTCTTTTGGAAATGATCCTTTCGATAAGCCTCCCTGTCGTGGATGTTCATCATATCTAGTGGAGCCCTACATTAAGTGTGCTGAATGTGGACCATCACCTTTCCTCCTGTGTCTGCAGTGCTTTACAAGAGGATATGAGTATAAAAAGCACCAGAGTGACCACAAGTATGAAATCATGACATCAGATTTTCCTGTGTTGGAGCCTGGCTGGACGGCGCAGGAGGAGATGGCTCTTTTAGAGGCCGTCATGGACTGTGGTTTTGGTAACTGGTCCCAGTCCAATGTGAAGACATTGATAAAGTGCATTTCAGTTCAGTGTGAAGATGACCAATTCGGGTTGAATGCTGAAGTGGTTTATGGAAAAAATTCCTTTCCCTTACGGAGGTGCACTCCATTTGTGACTGGATCTTATCATGGGGTAAGAGCTACTGGACAGAATCACACTGCTGCTGGTCAAGTTCAGGATTCATTTGCTGTGAATGGACAAATCAGTGCAACTGCAGGCTTCTCCACAAACACAGATGCTGTGAGCGCCGTCAGCCTAACGTTCACAGATGGGATCTCACCAGGATACATGGAACCAGATTGCATGGAAGACAACAGCCATGAGCTGATGAATAGAGATGAACGTTATGAAAAAGAGAAGCATGTGCGTCCAAAGGGAAGGAAGAAAAAGCCTAAGAGAGGGGGGAGAACATATCGAATTCACAATTAGATTGAAAAAGTGTCTAGCCAACATCTGATTGTTGTGAAATGTGATTTGCTTATAAAGATAACACTTATTTTCTGTAGATGTAGCATAAAGTATACTCTAACTCTATTTCTGTAAGCTCTAGTTCTAAAAAGCTTTACTAACTTATTCTATAACTCTAACTTTCTGTATTAAAATGCTAAATTTCTGTCTAAAATGCTTAGATTCATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000053_02739707_02746533.mRNA True 991 mRNA 0.41 9 2739494 2746582

Neighbor

gene id symbol gene type direction distance location
CI01000053_02716472_02737494 TADA2A coding downstream 1917 2716012 ~ 2737577 (-)
CI01000053_02694095_02694625 DUSP14 coding downstream 43322 2693398 ~ 2696172 (-)
CI01000053_02533620_02536887 NA coding downstream 201654 2533593 ~ 2537840 (-)
CI01000053_02497603_02508436 NA coding downstream 230771 2497590 ~ 2508723 (-)
CI01000053_02486308_02487685 NA coding downstream 251464 2485144 ~ 2488030 (-)
CI01000053_02753283_02763401 NA coding upstream 6496 2753078 ~ 2763797 (-)
CI01000053_02817187_02856529 TRAF4A, TRAF4 coding upstream 69284 2815866 ~ 2856648 (-)
CI01000053_02862161_02873752 NEK8 coding upstream 115149 2861731 ~ 2873752 (-)
CI01000053_02905181_02934126 GDPD5A, GDPD5B, GDPD5 coding upstream 158093 2904675 ~ 2934126 (-)
CI01000053_02968381_02979969 GUCY2F coding upstream 221641 2968223 ~ 2980046 (-)
G226847 NA non-coding downstream 23748 2712187 ~ 2715746 (-)
G226862 NA non-coding downstream 144028 2593320 ~ 2595466 (-)
G226834 NA non-coding downstream 170566 2568685 ~ 2568928 (-)
G226833 NA non-coding downstream 171765 2567473 ~ 2567729 (-)
G226848 NA non-coding upstream 1996 2748578 ~ 2751192 (-)
G226906 NA non-coding upstream 18531 2765113 ~ 2765353 (-)
G226919 NA non-coding upstream 20670 2767252 ~ 2767502 (-)
G226925 NA non-coding upstream 31393 2777975 ~ 2778676 (-)
G226914 NA non-coding upstream 95041 2841623 ~ 2846182 (-)
G226826 NA other downstream 172422 2565892 ~ 2567072 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other downstream 502098 2225210 ~ 2226481 (-)
G225812 NA other downstream 1272762 1459595 ~ 1466732 (-)
G225574 NA other downstream 2192626 543647 ~ 546868 (-)
G226963 NA other upstream 250135 2996717 ~ 2997268 (-)
CI01000053_03551506_03551965 NA other upstream 803751 3550333 ~ 3552847 (-)
G227604 NA other upstream 1340655 4087237 ~ 4087740 (-)
G228651 NA other upstream 3037901 5784483 ~ 5787690 (-)
G228750 NA other upstream 3185010 5931592 ~ 5932241 (-)

Expression


Co-expression Network