XLOC_000980



Basic Information


Item Value
gene id XLOC_000980
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 7700023 ~ 7701856 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00001554
GAGCCATTAGGCGATCATCGACAGAAGCAACAAACAATTCTTAAAGCTAAAACCGTCAGTAGTGTAGTTACCAGTATCTTAGCCGTTCAAACTAGAGTCACATCATGATGGAGAGGAAGAACTAACAACTTATACTCTGAACCATGACGTTTACGGTGGTTGGCTGACGTTTGACATCATTTCCATGAACCAGCACTCAGAAACACGAGAGCATCAATGATGTTGCATGTCCAAAGTCTTAcagatttgacttttttttttgtcctgacCTACAAATCAACATGTACTGTAAGTGTAATATTTACTTGCATAATGATTTGTTTCTCACATGGTTAAGGTGTTTTTTCC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00001554 True 348 lncRNA 0.39 2 7700023 7701856

Neighbor


gene id symbol gene type direction distance location
XLOC_000979 arglu1b coding downstream 26647 7662091 ~ 7673376 (-)
XLOC_000978 efnb2b coding downstream 40153 7632119 ~ 7659870 (-)
XLOC_000977 mxb coding downstream 96289 7574351 ~ 7603734 (-)
XLOC_000976 mxa coding downstream 129842 7562316 ~ 7570181 (-)
XLOC_000975 NA coding downstream 145684 7545049 ~ 7554339 (-)
XLOC_000981 BX908756.3 coding upstream 69701 7771557 ~ 7844362 (-)
XLOC_000982 BX908756.2 coding upstream 99675 7801531 ~ 7801646 (-)
XLOC_000983 radil coding upstream 145931 7847787 ~ 7894255 (-)
XLOC_000984 mmd2b coding upstream 206426 7908282 ~ 7920702 (-)
XLOC_000985 CR855320.6 coding upstream 218263 7920119 ~ 7920206 (-)
XLOC_000974 CABZ01075316.1 non-coding downstream 557880 7142039 ~ 7142143 (-)
XLOC_000973 CU571320.1 non-coding downstream 1246504 6453404 ~ 6453519 (-)
XLOC_000971 NA non-coding downstream 1299697 6398199 ~ 6400326 (-)
XLOC_000969 NA non-coding downstream 1526322 6159631 ~ 6173701 (-)
XLOC_000996 NA non-coding upstream 500534 8202390 ~ 8205228 (-)
XLOC_000998 NA non-coding upstream 803121 8504977 ~ 8510066 (-)

Expression



Co-expression Network