CI01000053_03448295_03455864


Basic Information

Item Value
gene id CI01000053_03448295_03455864
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 3447231 ~ 3455940 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000053_03448295_03455864.mRNA
GTATATAAGCCAGAAAAAAATCATCAAAAACAATTTTAATAAAGAATCTCTTGTCTTGATGCAAACCTCACTCGGTTTGGGTACAATATTAAACCTCAGGATACGATATATAGTATCACTCAATACATATAAAGCCACTTATACGATGTAAGATCAGGTTACATGAAATAATAAGCCCAGAACACTTGGTAAATCGTATACTTGCCAAAAGCATTTTAACACATTCAACCCGTACAAGATTATCAGGCTAAAATAGAAACTTTCTTCATACCTTATCCTCAAGAAACGCTGATGAAGAAAATAGAAAGGCTACTTGCATGTGCTGCAGCTCTCACATCTTGGTTTCCTATGACCTATGGTGCCCGCGAGTAAGTCAAAAGATATATTCGCAATTGCGAAAAAAAAAAAGAAGTCAGAATTCTGAGATAAAAACTCGCAATTCTGACTTTTTTTCTCGCAATTGCGAGTTTATATCTCAGAATTCTGACTTTATAACTCGCAATTGCGACTTTATATCTCAGAATTCTGACTTTATATCACGCAATTACGACTTTATATCTCAGAATTCTGACTTTATATCACGCAATTGCGAGATGTAAACTTTTCAAAGTCAGTACTTTTTTTTTTTTTTTTTAATTTAGTGGCGGAAACGGGCTTCCATACCTCTTGCCTCTTCTAAGTGGAACATATTTGCGTTTTGATTCTTTGGTTATTTCCCAGTTATTTCGAGGTGGCGTAGTCACTACAAATGAGCCACTTGCTACATGCGCACGCATCCAGTATTTTTTGTATACAAGAAACCCGTCTATACATATCGCGTGAGTGCTGGGAATTTTATCTTCCATACACGACAGACTGCTGCACTGAGACAGGGGCTGTTTATCTTGAGAGTGCAGGAAATTTTGTCCTCCGTACACGACGACAGACCACCGCATTGAGACGGGGCTGTTTATTGTGTGAGTGCTTTCTGTACACAGTAGGCCACGCCTCTGAGGCGAGGGGCTGCTTATCGTGTGAATGATGCATGTATAGATGATGAAGGGCCATGCAGGACCTGTACCGACATGAGAACAATAGCTGCAGTCTCCGCGCTCGGCTCGCAGATCTACCACGGGGGGAGAAGCATGACGAGCCAGGCTTATGAGGACAAGCTGTTTTCTTTCTTTGCTGCTGTTCGGCGTCGTGGGCGGCGGGGGAATGCCGACATCCCTGTGATACTGGGAGGCCATAACAGGGTATTTTATGCTATCCTGTATCCCATGCAGTTGGGCCATCTCCTCCTCCTGAGCTCCCGTAGAGGACAATGTGATGATGATGAGTGCAGTTATGATGAGAACAGCCACACACAGTAACACCAGCACACTGATAACTACAGACAGACTGAGGGATCCTGGGTCACATTCAGCCACATCTGAAACTGGGGTCGGA

Function

NR:

description
PREDICTED: A-kinase anchor protein 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000053_03448295_03455864.mRNA True 1428 mRNA 0.43 3 3447231 3455940

Neighbor

gene id symbol gene type direction distance location
CI01000053_03405451_03427728 PDCD5.S, PDCD5 coding upstream 19083 3405052 ~ 3428148 (+)
CI01000053_03318431_03325229 NA coding upstream 121718 3317222 ~ 3325513 (+)
CI01000053_03227130_03234740 CD151, CD151L coding upstream 212491 3227130 ~ 3234740 (+)
CI01000053_03088253_03119757 DHX36 coding upstream 327349 3088253 ~ 3119882 (+)
CI01000053_03068131_03069156 NA coding upstream 377982 3068038 ~ 3069249 (+)
CI01000053_03484197_03496907 NA coding downstream 27790 3483730 ~ 3497830 (+)
CI01000053_03520283_03525417 NA coding downstream 64092 3520032 ~ 3525462 (+)
CI01000053_03545885_03548117 NA coding downstream 89945 3545885 ~ 3548789 (+)
CI01000053_03572527_03585944 NA coding downstream 115648 3571588 ~ 3586271 (+)
CI01000053_03587596_03590525 NA coding downstream 130842 3586782 ~ 3590558 (+)
G226332 NA non-coding upstream 261508 3185514 ~ 3185723 (+)
G226257 NA non-coding upstream 367080 3079904 ~ 3080151 (+)
G226268 NA non-coding upstream 383096 3031203 ~ 3064135 (+)
G226424 NA non-coding downstream 8276 3464216 ~ 3473595 (+)
G226426 NA non-coding downstream 16091 3472031 ~ 3472447 (+)
G226392 NA non-coding downstream 52740 3508680 ~ 3511385 (+)
G226438 NA non-coding downstream 78235 3534175 ~ 3541583 (+)
G226443 NA non-coding downstream 84895 3540835 ~ 3541368 (+)
G226347 NA other upstream 172320 3272374 ~ 3274911 (+)
G226292 NA other upstream 400448 3036602 ~ 3046783 (+)
CI01000053_02594164_02594541 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, BRAFLDRAFT_114344, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 851764 2592558 ~ 2595467 (+)
G225952 NA other upstream 1573936 1872874 ~ 1873295 (+)
G226399 NA other downstream 164858 3620798 ~ 3697529 (+)
G227317 NA other downstream 959011 4414951 ~ 4415593 (+)
G228257 NA other downstream 1919613 5375553 ~ 5378449 (+)
CI01000053_05471449_05512831 LRRC75B other downstream 2053304 5471449 ~ 5513074 (+)
CI01000053_06725452_06758944 NA other downstream 3267259 6725452 ~ 6758944 (+)

Expression


Co-expression Network