Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000053_03592810_03602102 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 3592655 ~ 3602437 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| MHC class II antigen |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000053_03592810_03602102.mRNA | True | 1531 | mRNA | 0.41 | 6 | 3592655 | 3602437 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_03558891_03566444 | NA | coding | downstream | 23303 | 3558783 ~ 3569352 (-) |
| CI01000053_03551506_03551965 | NA | coding | downstream | 40459 | 3550333 ~ 3552847 (-) |
| CI01000053_03499011_03502122 | NA | coding | downstream | 90392 | 3498398 ~ 3502263 (-) |
| CI01000053_03456147_03457909 | NA | coding | downstream | 134456 | 3456035 ~ 3458199 (-) |
| CI01000053_03403259_03403534 | NA | coding | downstream | 188626 | 3403037 ~ 3404029 (-) |
| CI01000053_03620673_03622682 | NA | coding | upstream | 17803 | 3620240 ~ 3622685 (-) |
| CI01000053_03625343_03653163 | NA | coding | upstream | 22533 | 3624970 ~ 3653334 (-) |
| CI01000053_03665103_03666630 | NA | coding | upstream | 62153 | 3664590 ~ 3667700 (-) |
| CI01000053_03696522_03699590 | NA | coding | upstream | 94021 | 3696458 ~ 3699699 (-) |
| CI01000053_03823296_03825234 | NA | coding | upstream | 220657 | 3823094 ~ 3825328 (-) |
| G227047 | NA | non-coding | downstream | 45514 | 3484863 ~ 3547141 (-) |
| G227225 | NA | non-coding | downstream | 51333 | 3540756 ~ 3541322 (-) |
| G227049 | NA | non-coding | downstream | 101746 | 3395768 ~ 3490909 (-) |
| G227174 | NA | non-coding | downstream | 164333 | 3405148 ~ 3428322 (-) |
| G227184 | NA | non-coding | downstream | 171839 | 3413501 ~ 3420816 (-) |
| G227069 | NA | non-coding | upstream | 1461 | 3603898 ~ 3606489 (-) |
| G227046 | NA | non-coding | upstream | 15171 | 3617608 ~ 3620177 (-) |
| G227236 | NA | non-coding | upstream | 33280 | 3635717 ~ 3636283 (-) |
| G227051 | NA | non-coding | upstream | 104102 | 3706539 ~ 3707610 (-) |
| G227071 | NA | non-coding | upstream | 127041 | 3729478 ~ 3729711 (-) |
| G226963 | NA | other | downstream | 595387 | 2996717 ~ 2997268 (-) |
| G226826 | NA | other | downstream | 1025583 | 2565892 ~ 2567072 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | other | downstream | 1355259 | 2225210 ~ 2226481 (-) |
| G225812 | NA | other | downstream | 2125923 | 1459595 ~ 1466732 (-) |
| G227604 | NA | other | upstream | 484800 | 4087237 ~ 4087740 (-) |
| G228651 | NA | other | upstream | 2182046 | 5784483 ~ 5787690 (-) |
| G228750 | NA | other | upstream | 2329155 | 5931592 ~ 5932241 (-) |
