CI01000053_05362044_05364177 (PBLD2, PBLD)


Basic Information

Item Value
gene id CI01000053_05362044_05364177
gene name PBLD2, PBLD
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 5360922 ~ 5365697 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000053_05362044_05364177.mRNA
CTTTAAAAAAAAAACGTTTTCCTATTAGAGCTGTACACACTTGTTAGGGGTATATGGGGGGAAATGCCTCCCATAAGAACAACGTGGATTTACATTCAAATTGAAGCATATCTAGACAAGTTTTGCATGTGCAGGATGACGATGCATCAGCCAACGTGTTATAGGAAATAAATAGAAACATTTGCTAATTTAGTTGTCATAGCACAAAATGTCAAATATTAAAAGAGGAGTAGATGGCCCCCTAATGGGGTAAGAAGCCCCCTGGATAAACTTTTACAGAATGTATGACTTTTGATTTAACTGATATAGCCTAATGCAAAATACTAAATAAACTATTGTATTTAATTTTTTATTTTGAAAATGTACTTGATAATAATTGAATAACCGATGACAGGCAAAACAGAATACCAGTAAAAGAGATTCATCTGAAAGGTAAAAATTATTATATAGGCTAACCTATACAAATTTTAAGCCTAACTTGTGTAATGGCCTATTTTAATTGGAGATAATTACACTAAGTGCAAATAGCGATAGATTCTATTTACACTATGTAACAGCAGTATTTTCTTTGCAATAAGTGTAAATAATAGTTAGATACAGTTTCCATTTCAGTATTTTAGTAGGCCTACCCCTAACCCTACCCGATAAACACTTTATTATTAAGTAAACGTTAGGAATTTTTATTCCACTTCTCACATATTTTCTTCATATTTATTGAAAATAAATGGCGAACGAATTCGGCAAAAGGCTGAATCGAACTCGGGTCGCTCGCTTCAATATTTATTTCGCCTTACTCGCTACGCCACTGTTACAAACACACAACGTGCGTGTTTTTTTTTATAGTTTTGTCTGTACCAACTAGACATTGGTGGGCGGAACTTCTGCCAAATTCTTGACAAAATTGGCACTTGGCAGGGGCAATGGTGCCGTTTTAGGCAATGGTGACATGAGGTGGAGCAAAAAGAAAAGCGCCCATTGGATAGCAATAACAAAATAGAAGTGAGGTTTTAGATTTAATAAGTCAGACGAACAGCTGGGATCTCTACTTTATTGCATGTTCAATAAAGTTAAACTTTTTTGAGACCAGAACTAAAGAGACAAAGACAGCGAATTTGCCCGACAATGGAAATTCCAATATTTACTGTTGATGCTTTTACCAATGTACCTTTCAAAGGCAATCCTGCTGCAGTATGTCTTATTGAGAATGTGCAAGGTTTGGGTTACGCTGGTTTACCCCCAAAAGTGAGTATCCACTATGTGGACATGCAACCCTGGCCTCAGCAGCAGTGCTCTTTTACCTTAAAAACTATGAGTGGGGAGCTTAATGTGCGCCAGCATGAAGAATATCTAATAATGGACTTCCCCTTAAACAAACCAAAGCCCCAGGACCAACATGAAATCAAGGATCTTTTGAAGGCTGCTGTTGGAGACTTACCCATTCAGGATGTGTGCTACAGTCCAACCATTAAAAATCTAATGATTCGTCTAGCTGACACATGCAACAGGTCTGATCTTATATCTTTGAGGCCAGAGGCAGAGACTCTTGTGAAAAATGAGGCCACTGGTAAGATTAAAAGTCTCATCGTTACACTGAAAGGAACACAGACCACTCAGTCTGGATATGACTTCTACTCCCGTGTCTTCTCACCCTGGGTTGGTGTCCCTGAAGATCCAGTCACTGCTTACCAGTGTTCCAGTCGTGGTGGTGAATTGAAGCTGGAGATAAGAGATGACGGTCGACTGGACATCATTGGTCAGGCGCGGATCATTCTTCAGGGAACTCTTAAAATCTAGACAGTCTTGCACAACCGATTCATTGAATTTGCAGATAGTTTTGATGGAAATCATGTGAATATAATTTCCACTTTATATTAGTGTGATGGTGCATTCTAAGTTATGTACCATTTAATAACATTTATACAACAGTTCGTTCTGGTTCTCGATTCTGATTGGCTGAGAGCCTTTTTCAGCTCAGATCCACTGATTGCCTATGGCCAAATCACAGCCGTGCTGATATAGAGCAATATTGCACGGCTACGAGTGTGATATTGCGTTTATACAACAGTTCGACAGCGCAAGTGTAATAAACAACAATGGTGTCTCTCTCTTGTGCGGCACTACTTCCTTCCGCCACGGATTCAAATCTCAAGTTGACAGTTTAACAGTTGAGCCCAAGCCTCCGTTACTAATTCTGAAACGTCACTTTAGAACTAGTAAAGAAGGAACGCTGAGTTGCTTCATTGAATATTGTATTTTATACACAGTTCATTCTGGTTCGCTATTCTGATTGGCTGAGAGCCTTTTCCGATATTCTGCTGGGCGATACCACTTATTTTGTTTTCGATACGATACTGATACTTTCAAAGGCCAGTACTGTCGATATCGATATAACTCTAAAGTGAACTTTTAAATTATTATTACATTTATTAAATTATTAAATTACTAAGAGTAAATTGGGTAATGGTACCCACTTAACATTATATTTAAAAGGCATTTTAACATTCAATACGCCTTAATTGCAATTTATTAGATTATATTTCTGTTTACACATGGTTAAAATATGTCAAGTTGGAGGTACATATTTACATATATGTATATATAAAACATATTTAGATGTTTAACTAAAACATAATTTTATTGTGTTAGTCCTTATGTCAGGTGGTAATCAGCAAGAAATACCTTAATTTTTTAATTAATTAAAATTATTCATAAATGAAGTGGAAAAACTCAACCCTGTCACAAGTTTACAACACTGAAACAATGAACCCTATGGGACAGGGTTGAGTTGTTTTGCTCAAAATGGCCACTGCTCCTTGTGTATTGTAGCAGAGTAGAGCATATATTTTGAGATGGGATTTTAAATCATTTGGTGTCCAAGTGATGTTGGCTGCCACCTTGTGGTACAATACTGGATTTTACTGTGGAGTCAAGAACAAAACAGATAAAGTTTATAAAATGTATTTTATTTATTTCTCTGAACACTCACCCCCCACCCCCTTCATATCTGAAAAGATTACCCATTTTCAAGAATTCCTATTTTCAACAATGTTCCTACAATCCTGCAGAAAAAAGTGAATCTTGAGCACGGTGATTTGCCTTATGGATTAAATTAACATGACCTGTGGCTAGTCTAACTAGGTAAGATTTTTTTGTTTAATATATATATATATTAATGGTCCCTGTTATCTAAACAAGTCGTTTTTGTAGAATGCTCAAAGAATATAACATTATGAATTTCTTCTTTTTAAGAGTCCTGATACAAGGCTTTACTAAATAAAAAAATTCAAAAAAAAAAAAACACACATTCTGACATA

Function

symbol description
pbld2 Predicted to enable isomerase activity. Predicted to act upstream of or within biosynthetic process. Predicted to be active in cytoplasm. Is expressed in myotome. Orthologous to human PBLD (phenazine biosynthesis like protein domain containing).
pbld Predicted to enable isomerase activity. Predicted to act upstream of or within biosynthetic process. Predicted to be active in cytoplasm. Orthologous to human PBLD (phenazine biosynthesis like protein domain containing).

NR:

description
Phenazine biosynthesis-like domain-containing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000053_05362044_05364177.mRNA True 3314 mRNA 0.36 7 5360922 5365697

Neighbor

gene id symbol gene type direction distance location
CI01000053_05338500_05348218 HNF1A coding upstream 12704 5338500 ~ 5348218 (+)
CI01000053_05332254_05334016 NA coding upstream 26602 5332254 ~ 5334320 (+)
CI01000053_05320241_05329853 HPS4 coding upstream 31058 5320241 ~ 5329864 (+)
CI01000053_05314523_05315601 NA coding upstream 44332 5314523 ~ 5316590 (+)
CI01000053_05296599_05301528 PLA2G1B coding upstream 59187 5296555 ~ 5301735 (+)
CI01000053_05435608_05443587 GGT5A coding downstream 69782 5435479 ~ 5445226 (+)
CI01000053_05471449_05512831 LRRC75B coding downstream 105752 5471449 ~ 5513074 (+)
CI01000053_05526931_05550454 NA coding downstream 160932 5526629 ~ 5550472 (+)
CI01000053_05563771_05573792 RNF34, RNF34A coding downstream 198074 5563771 ~ 5573965 (+)
CI01000053_05589379_05590208 NA coding downstream 223195 5588892 ~ 5591102 (+)
G228274 NA non-coding upstream 99552 5261031 ~ 5261370 (+)
G228263 NA non-coding upstream 162354 5198356 ~ 5198568 (+)
G228243 NA non-coding upstream 204141 5156422 ~ 5156781 (+)
G227979 NA non-coding upstream 234515 5125961 ~ 5126407 (+)
G227974 NA non-coding upstream 246119 5114577 ~ 5114803 (+)
G228311 NA non-coding downstream 46262 5411959 ~ 5412340 (+)
G228309 NA non-coding downstream 46872 5412569 ~ 5413283 (+)
G228317 NA non-coding downstream 64660 5430357 ~ 5430563 (+)
G227317 NA other upstream 945329 4414951 ~ 4415593 (+)
G226399 NA other upstream 1663393 3620798 ~ 3697529 (+)
G226347 NA other upstream 2086011 3272374 ~ 3274911 (+)
G226292 NA other upstream 2314139 3036602 ~ 3046783 (+)
CI01000053_02594164_02594541 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, BRAFLDRAFT_114344, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 2765455 2592558 ~ 2595467 (+)
G228257 NA other downstream 9856 5375553 ~ 5378449 (+)
CI01000053_06725452_06758944 NA other downstream 1357502 6725452 ~ 6758944 (+)

Expression


Co-expression Network