CI01000053_05589379_05590208


Basic Information

Item Value
gene id CI01000053_05589379_05590208
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 5588892 ~ 5591102 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000053_05589379_05590208.mRNA
ATATAAATTCAAAGGTGTCTTTTGCAAAAATTAGCATGTTATGTTCCCTAGGAGAATAAAATACTACACTCATTACACTCGTGTCCCTAATTATTTTTTAACCTTTCAAATGGGTGCAAAAAGAAAAACAGTTTTAGTCTAGATTTTGCCTGCACTTAAAAACAACAAACCAAGCGTGATGTTCCATTTCCTAGAAAACAGTTTGAGCAGCAGAGCATTATGGGAAGGGAACTTAAGGGCAACACATGTCCAGTCATGCTGTTGCTTAAAGGAACTTTATTCTTCCTTTAATACAGGTTTTACTCCCTAAAAACCCTGCATAAGTGTGAAAATCAGAGTACATCACAACCAAAAAAGTCTATATCTACAACATTTTAGTTCTCCCAACAAAACAAATGAGACAAACCAGTATAAACCACATCCAAACACAAAGGTAAAGCAATAAGAACATGTTTTTTTCCTTAAAACAAGTCTTTCTAAAGGAAGCATGCATGTGTCAAACCAATCACAACTGATAGCAGAAGCTCAATGGAGACAAACAATAAGACAGAGGCTCAGTGGTGATACCACTCTTCTCTGTTGTATCAATGTTTTCTCTCCTGTCGCATGGAAACCTCTCCAGTCTTATTATTACTGCTGCAATAAAGCAAAACTCAAAAACATAAAAAACAATGGACAGAGAAGAAAGATGGCAGCTGCACAGGCACACACCAGCCTGCTATCTCATGCATATGCACCAGAAAAAGAAGACGAGGGAGAGGGGGCCTCGACTCAGCCAATCACAGACCACCTGGCGTCCAGTTACAGGCTTGCCTACAAAGAGCACACATTGTACTGTGGGTCTGGGTGGGAGATGGAGAGGGGGAGGGGAGGCACTGCTGCACACAAAAGGACTACTGACATTACCATGCGAGAGCAAGGTCTCGCTCTGCGAGTGATTCAGAGGGTCTGATGTTGTCTTCCTCTTACAAATACAGGAAGTTATCGGTTAACTTGGGTTTGATTGTTTCGGTCTAATGTGTTGCTTTCTGCAACCATTGGTGCATGAAAGGCTTATACAGCAGTGTTAGTGAAACATGGTGGGATGCTCATTTGAATGACAAAGGTCAAATATATCACATTTAAGTGCCTCTACTTCATTTAGGAAATCTCAAATAAGTCAGCGTTTTTACTAATGGAACACTGAATGGCAGATTTGGGCATCCTCATTTATGTTGTTTGAACTAAAATACAACATGTATTGATCAAATGTTAAGATTTAAATCAAAAGACTGAAATCTTCAGAACAATCTGTTCAATTGTAATCAGAAATACTCAAAAAGGAAATCAATTTGTCACACAGATACTAATATAATGTAAATATAAAATACAAAAAAAGTTTATATATATATATATATTAAAAGTTTTATGTAATAGTGTTAATATAAAAACTGACTAAAGCATATCTGTATGAAGCTGTCTTAAACATCAGGGGAGACCGGGGCTAGTTGTCACACAGCAAAGTTGTTGCAAGGACTTTACTTCAGGTTTTGAGTCAAAAGGAATGTTATTTTAGTACAGCTGAGACACTATTATAGTTTTTTATTAATATCGTTTTATTTTTGTTTTCATCTTCATTTAAATTTTAGTCATTTTGTAATGCGTTTTTTTTTTACATTATTTTACTATTATTATTACTTTTTTTTTTTTTTTTACATGTCTATACAGTTTGTATTCACTTTTATTTCTATTTTTTGTTAATTTACTACCTCAAGTTAAACTAAATGAAAAGAAATGTTGCCTTGGCAACACTTTGGTAACACTTTACAATAAGGTTCATTAGTTAACTGTGTGACATCGTTGTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000053_05589379_05590208.mRNA True 1846 mRNA 0.35 2 5588892 5591102

Neighbor

gene id symbol gene type direction distance location
CI01000053_05563771_05573792 RNF34, RNF34A coding upstream 14927 5563771 ~ 5573965 (+)
CI01000053_05526931_05550454 NA coding upstream 38420 5526629 ~ 5550472 (+)
CI01000053_05471449_05512831 LRRC75B coding upstream 75836 5471449 ~ 5513074 (+)
CI01000053_05435608_05443587 GGT5A coding upstream 143666 5435479 ~ 5445226 (+)
CI01000053_05362044_05364177 PBLD2, PBLD coding upstream 223195 5360922 ~ 5365697 (+)
CI01000053_05593016_05597420 ORAI1, ORAI1A coding downstream 1914 5593016 ~ 5597488 (+)
CI01000053_05704944_05710574 GCK, GK coding downstream 113746 5704848 ~ 5711121 (+)
CI01000053_05764395_05769061 NA coding downstream 173293 5764395 ~ 5769085 (+)
CI01000053_05784784_05786704 DUSP2 coding downstream 193164 5784266 ~ 5787658 (+)
CI01000053_05796556_05798076 ADRA2B coding downstream 204771 5795873 ~ 5799824 (+)
G228337 NA non-coding upstream 36469 5551999 ~ 5552423 (+)
G228374 NA non-coding upstream 46353 5542258 ~ 5542539 (+)
G228334 NA non-coding upstream 64681 5523580 ~ 5524211 (+)
G228392 NA non-coding downstream 13681 5604783 ~ 5605652 (+)
G228394 NA non-coding downstream 18191 5609293 ~ 5609517 (+)
G228406 NA non-coding downstream 52375 5643477 ~ 5643811 (+)
G228414 NA non-coding downstream 71930 5663032 ~ 5663257 (+)
G228369 NA non-coding downstream 100424 5691526 ~ 5696553 (+)
G228257 NA other upstream 210443 5375553 ~ 5378449 (+)
G227317 NA other upstream 1173299 4414951 ~ 4415593 (+)
G226399 NA other upstream 1891363 3620798 ~ 3697529 (+)
G226347 NA other upstream 2313981 3272374 ~ 3274911 (+)
CI01000053_06725452_06758944 NA other downstream 1132097 6725452 ~ 6758944 (+)

Expression


Co-expression Network