CI01000053_05690377_05690558


Basic Information

Item Value
gene id CI01000053_05690377_05690558
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 5690377 ~ 5690777 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000053_05690377_05690558.mRNA
ACAAAATCTACAAACAACGTGGGAACTAAAGTTAATGTTAACTTGAGTGATTTACCAAAGTCTTGGTGGGTCTGTGTAGTTTTTATTGGCCTGATTTAGAAACAATTAAAGGTGAAGCATCACATTAATTTGACTTTTTCTCGTGGGATGCCTATAGATGGGTGCAGGTGATGTCCTGTAAGTGAACTTCTCAGCAGAGTGTGTTTGTAGAGGATCATGATGGCTCAGCTGGAGAATGGGCGTCTGTCGTCTGATGACACTATGAGTGTGATGACTATGGGCAGTCAGTTTGACGAGGAGAGCTCCTTCGGATCGGACTCTGAAATCAACGGATTCACCAGCTCGAGAAAAATTGACAAGTATGGATTCATCGGAGGAGCCCAGAAGTATTCAGAGGAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000053_05690377_05690558.mRNA True 401 mRNA 0.43 1 5690377 5690777

Neighbor

gene id symbol gene type direction distance location
CI01000053_05675892_05686424 NA coding downstream 3953 5674979 ~ 5686424 (-)
CI01000053_05621226_05622308 APJA, APLNRA, APLNR coding downstream 67879 5620409 ~ 5622498 (-)
CI01000053_05577140_05583728 KDM2B, KDM2BA coding downstream 105612 5577046 ~ 5584765 (-)
CI01000053_05552919_05561938 ANAPC5 coding downstream 127416 5552169 ~ 5562961 (-)
CI01000053_05521820_05524159 GPX8 coding downstream 166218 5521615 ~ 5524159 (-)
CI01000053_05692640_05695728 MYL7, MYLC2A, MYL7.L coding upstream 1858 5692635 ~ 5695728 (-)
CI01000053_05732296_05750809 NPC1L1 coding upstream 40601 5731378 ~ 5750809 (-)
CI01000053_06038638_06043939 FAHD2B, FAHD2A coding upstream 347559 6038336 ~ 6043939 (-)
CI01000053_06060129_06071679 RNF10 coding upstream 368832 6059609 ~ 6071679 (-)
CI01000053_06162569_06179766 GOLGA1 coding upstream 471302 6162079 ~ 6180102 (-)
G228622 NA non-coding downstream 23616 5666403 ~ 5666761 (-)
G228620 NA non-coding downstream 26645 5663499 ~ 5663732 (-)
G228619 NA non-coding downstream 27215 5662954 ~ 5663162 (-)
G228610 NA non-coding downstream 41127 5649033 ~ 5649250 (-)
G228608 NA non-coding downstream 46515 5643605 ~ 5643862 (-)
G228639 NA non-coding upstream 66477 5757254 ~ 5757596 (-)
G228641 NA non-coding upstream 71522 5762299 ~ 5762553 (-)
G228651 NA non-coding upstream 93706 5784483 ~ 5787690 (-)
G228666 NA non-coding upstream 108292 5799069 ~ 5799843 (-)
G228668 NA non-coding upstream 112213 5802990 ~ 5803250 (-)
G227604 NA other downstream 1602637 4087237 ~ 4087740 (-)
CI01000053_03551506_03551965 NA other downstream 2137406 3550333 ~ 3552847 (-)
G226963 NA other downstream 2693109 2996717 ~ 2997268 (-)
G226826 NA other downstream 3123305 2565892 ~ 2567072 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other downstream 3452981 2225210 ~ 2226481 (-)
G228750 NA other upstream 240815 5931592 ~ 5932241 (-)

Expression


Co-expression Network