G225499


Basic Information

Item Value
gene id G225499
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 140674 ~ 141220 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU255803
GCTAAATACAAAACATTTTAAGAAATTGCTAAAGCAGCAGGGAAGATGAACGTGCATGTGTTATTTTAATTTGTGTTAGAGTTGCATGATTCTGGATAAAATGAGAATCAAGATTTTTTGTTTGTTTCAAATAGAGATCATGATTCTCCCATGATTCTGAACAGACAACTAAACAAAATAGCATATAATTATTTACTAGAGGACAAAATATTAATTGCTGCAGTCTATTTAAAAATATTTAATTTAATTGAATTATTTAAAAAATGAGTTTGAATGAATGATTTAATGACTCACTCATAACTACTTCACTTGTTTCATTACTGGATGAATCAATGTTTTTGAACAAATCTTTTGAATGAATCATTCAATGTCAAATACATTTTACGTCACTTTGGCGCCTCCTAGTGGCGTAACGATATAATCGATACAACCGTTATTTGAAGCGTCAAGTTAATTTTTTTCAAATGTGATTTGATCTGATTGAATCGAGATCGCGATCTGTAGACACATTGATGTGGACGTGTCGCATTAAAGCATTTCAGTGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255803 True 547 lncRNA 0.31 1 140674 141220

Neighbor

gene id symbol gene type direction distance location
CI01000053_00116887_00128931 NA coding downstream 10945 116666 ~ 129729 (-)
CI01000053_00094748_00113755 ULK2 coding downstream 26919 94497 ~ 113755 (-)
CI01000053_00236043_00262938 SGSM2 coding upstream 94620 235840 ~ 263564 (-)
CI01000053_00292771_00295073 TNFAIP1 coding upstream 150694 291914 ~ 295073 (-)
CI01000053_00379771_00382260 NA coding upstream 238489 379621 ~ 382260 (-)
CI01000053_00390989_00410148 SUPT5H coding upstream 249579 390799 ~ 410148 (-)
CI01000053_00432322_00449797 NA coding upstream 291049 432269 ~ 449797 (-)
G225497 NA non-coding downstream 51945 88501 ~ 88729 (-)
G225479 NA non-coding downstream 122614 17234 ~ 18060 (-)
G225505 NA non-coding upstream 14031 155251 ~ 155658 (-)
G225466 NA non-coding upstream 19497 160717 ~ 183596 (-)
G225534 NA non-coding upstream 89039 230259 ~ 230468 (-)
G225467 NA non-coding upstream 131736 272956 ~ 280959 (-)
G225574 NA other upstream 402427 543647 ~ 546868 (-)
G225812 NA other upstream 1318375 1459595 ~ 1466732 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other upstream 2076228 2225210 ~ 2226481 (-)
G226826 NA other upstream 2424672 2565892 ~ 2567072 (-)
G226963 NA other upstream 2855497 2996717 ~ 2997268 (-)

Expression


Co-expression Network