Gene
RNA
| Item | Value |
|---|---|
| gene id | G225606 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 493053 ~ 493289 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| E3 ubiquitin-protein ligase CBL-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU255925 | True | 237 | lncRNA | 0.32 | 1 | 493053 | 493289 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_00454429_00457235 | NA | coding | downstream | 35818 | 454412 ~ 457235 (-) |
| CI01000053_00432322_00449797 | NA | coding | downstream | 43256 | 432269 ~ 449797 (-) |
| CI01000053_00390989_00410148 | SUPT5H | coding | downstream | 82905 | 390799 ~ 410148 (-) |
| CI01000053_00379771_00382260 | NA | coding | downstream | 110793 | 379621 ~ 382260 (-) |
| CI01000053_00292771_00295073 | TNFAIP1 | coding | downstream | 197980 | 291914 ~ 295073 (-) |
| CI01000053_00496924_00507195 | NA | coding | upstream | 3434 | 496723 ~ 507195 (-) |
| CI01000053_00629840_00639156 | NA | coding | upstream | 136424 | 629713 ~ 639171 (-) |
| CI01000053_00647818_00652652 | NA | coding | upstream | 154419 | 647708 ~ 652719 (-) |
| CI01000053_00656235_00664346 | MAP6B | coding | upstream | 162162 | 655451 ~ 664346 (-) |
| CI01000053_00667421_00672829 | THAP12, PRKRIRB | coding | upstream | 173786 | 667075 ~ 674421 (-) |
| G225604 | NA | non-coding | downstream | 1921 | 490923 ~ 491132 (-) |
| G225467 | NA | non-coding | downstream | 212094 | 272956 ~ 280959 (-) |
| CI01000053_00236043_00262938 | SGSM2 | non-coding | downstream | 245660 | 235840 ~ 263564 (-) |
| G225534 | NA | non-coding | downstream | 262585 | 230259 ~ 230468 (-) |
| G225571 | NA | non-coding | upstream | 31205 | 524494 ~ 525945 (-) |
| G225570 | NA | non-coding | upstream | 32828 | 526117 ~ 527530 (-) |
| G225620 | NA | non-coding | upstream | 59187 | 552476 ~ 556059 (-) |
| G225622 | NA | non-coding | upstream | 77767 | 571056 ~ 571257 (-) |
| G225665 | NA | non-coding | upstream | 254092 | 747381 ~ 747619 (-) |
| G225574 | NA | other | upstream | 50358 | 543647 ~ 546868 (-) |
| G225812 | NA | other | upstream | 966306 | 1459595 ~ 1466732 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | other | upstream | 1724159 | 2225210 ~ 2226481 (-) |
| G226826 | NA | other | upstream | 2072603 | 2565892 ~ 2567072 (-) |
| G226963 | NA | other | upstream | 2503428 | 2996717 ~ 2997268 (-) |
