G225570


Basic Information

Item Value
gene id G225570
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 526117 ~ 527530 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU255884
TAGATTTATTATTATTTTATTTCACAAAGATTTAACAGGCTATATACAGCATGATTTATTTCTGTTTCTTAGCTTGAGTGTTTTTGTTTTAACAAAGGGATTCTAAAATTCGTTACTTGTTGCTCAATTTCATATCATTTTAGATACAAAATAAGTTAAAATAACACAAACAGCAGAAATTGAAATATTCATCAAACAAAGTGTTTATTATTTCTGTCCAATGTTTAAAATTGGATGTGCACTGAAAAGTGGATTTCAAAAACCCTTAAAGGTGCAGTATGTAAGAATTCTGTCCGCTAGAGGTCGCTAGAGGCCTATTCAAAACAAAGGCGTAGCTTGATGACGCCAAGTTTGAGTGCGGAATCTTGGGACATGTGGTCTTCACCTCAATGGACGGTGCAAAAGAATAGGAATAGGACTCGGGAAGAAATCATGTTCATGGATGCAATTATTAACGTTATTGTAGTATGAAGCAGAGCAGGACCGAATGTTGTGGGAGCTGAACGAGGCCGCTGGAGCGACTGCGCAACACACGCCTCACGAGAAGCGAAACTTTTATTATGCCACAGTCGCCGGCGCGGCTTCCGCTTTTCCAGTCATGAGTATGAGGTAACGCAGTTCTGTTTATCATATTAGATACATTTGAGTGTGTTGAAAATGTTATAAAGTTACCCTGTGCGTTCGCTCGGCGCAGAGCCATAGAGAGAGGCGGCTGCTGTGAGACACTGTTACACACTGCAGTAAGCTAGATCGATTTTAGTATATCATATTAAATGCTGGATGGCTTGTGTTGATAAATGGCATGCAAATAATTTTAAAACATATTGTATGATGAAGAAAATTCTGTATTTTACTATAAATAAAGCTGCATCTGATTATGCTATGTTAGCTACTTGACAAAATAGTGTTTTCCTCTGAGGCATGGTAAAGCATGGTACTCGCAAAAAAATCAAGAAAATTAGATTTAAACAATAAGACTAAATGTGTTGAGCTATATAACAACAATTAGTTTTCTGTCTATAAATATATCAAAACAGTTGTTCCCTTGTCTATTAAAACGTATAATATATTAAAGCGTCTTTGGTGTTTCAATGGTTTATACAAAATAAAACCGGAAACCGAGGCAGACGAGGCCAAGGGTTAACGCGGGTATGACGCAATTGACAGGCGACTCCTCACATGTCCCGGAGCCTTGGTTAAAATTGCAATTTTCTCACGAATCACAAATAGTTGGAAACATTTGGGATATTGTAAATACTCAAGTGAACTAAATATATAACACTGGCCTAGTGGTTTTTGGATATTTTACTGCAAAATTCTTACATATTGCACCTTTAAAGGGATAGTTTACCCAAAAATGAAAATTATCCCATGATTTACTCACCATCAAGCCATCCTAGGTGTATATGACTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255884 True 1414 lncRNA 0.37 1 526117 527530

Neighbor

gene id symbol gene type direction distance location
CI01000053_00496924_00507195 NA coding downstream 18922 496723 ~ 507195 (-)
CI01000053_00454429_00457235 NA coding downstream 68882 454412 ~ 457235 (-)
CI01000053_00432322_00449797 NA coding downstream 76320 432269 ~ 449797 (-)
CI01000053_00390989_00410148 SUPT5H coding downstream 115969 390799 ~ 410148 (-)
CI01000053_00379771_00382260 NA coding downstream 143857 379621 ~ 382260 (-)
CI01000053_00629840_00639156 NA coding upstream 102183 629713 ~ 639171 (-)
CI01000053_00647818_00652652 NA coding upstream 120178 647708 ~ 652719 (-)
CI01000053_00656235_00664346 MAP6B coding upstream 127921 655451 ~ 664346 (-)
CI01000053_00667421_00672829 THAP12, PRKRIRB coding upstream 139545 667075 ~ 674421 (-)
CI01000053_00678066_00685960 DYRK1A coding upstream 150402 677932 ~ 687806 (-)
G225571 NA non-coding downstream 172 524494 ~ 525945 (-)
G225606 NA non-coding downstream 32828 493053 ~ 493289 (-)
G225604 NA non-coding downstream 34985 490923 ~ 491132 (-)
G225467 NA non-coding downstream 245158 272956 ~ 280959 (-)
G225620 NA non-coding upstream 24946 552476 ~ 556059 (-)
G225622 NA non-coding upstream 43526 571056 ~ 571257 (-)
G225665 NA non-coding upstream 219851 747381 ~ 747619 (-)
G225668 NA non-coding upstream 221721 749251 ~ 749495 (-)
G225563 NA non-coding upstream 280637 808167 ~ 809734 (-)
G225574 NA other upstream 16117 543647 ~ 546868 (-)
G225812 NA other upstream 932065 1459595 ~ 1466732 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other upstream 1689918 2225210 ~ 2226481 (-)
G226826 NA other upstream 2038362 2565892 ~ 2567072 (-)
G226963 NA other upstream 2469187 2996717 ~ 2997268 (-)

Expression


Co-expression Network