XLOC_009817


Basic Information

Item Value
gene id XLOC_009817
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 17548791 ~ 17551059 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021911
TCACTGAAACTTTCTTTATTTCATGGCAGCTTTGgcattacaaaaatacaaaaatcatagTTTCCCTATATAGTTGATTTAAGCACCCTTCATAGATTAGTAGAGGTTACAACAGACAGTGAATAAAACCATTCAATATCAAGTGTACTAGGTACTAATCTGGCACAATGAATGCCTAGTATTACTGGAAGAGTCTTAAATAGACATCTATTTTGGATATTAACCCTTTCATAGGAAAACTAAAAACTTGTACATATTTGTTACAATAACAAACACATGTAGGGCTCACTGTAGGTGTCACAACACTTTAACCATTACTATTAAACAAACATTCCAAACTAGGTGAACACAAACAGAGGAATGCATTGATTACCTACAAAAACAGGTTTAAAAGCAAACTtgacacagctgaagtcagaatcactattgccactttttatttaaaacaacactTTGTTTCTTGAACACCAAaagcagttttagtttttaatagcagttCATTAATCTACCCCAGCCCATTTATAATTTTAGTATTTGCTTAAAATGAATTTATGCCCATATTGATCTCCCAAGTCAAAGAAACATTTTAACTAGGAAAACAACAGTTTCTTGAAagcaactgtttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgagagagaaATTATGCTAAAGTGGACAAGTGTGAAACGTAGAAGAGTGTTTCTCGAATACATAGAAAATGGCTTGCTTAAATTTACAGTGTACATTCCTATGAGGAAAAATGTTAAGAAGTGCAGATCGGGAAGACTGTCTAAATATTGGAATGTCTATATAATACAAGTTGTGCTGATGAAGTGCAAAAGCTCTTTACCGCCACCtccaggcttttttttttttaaaaaagactaTAATACTTTTTCTTTAATGTTCGTTTATCGATTTTTAGAATGTttgaagtagaaaaaaaacattgaaggaGACAAAATCATGCTGCATAATTACATGCAtaattataaaacacattttgagAATACATGCTTTTTGACAATACCCCACATATAGtgcttataaaaaatatatagtaaaaaacaAACGCACCATTTGAAATCTGGAATTTTGAAATTAAACTAATATTTTGTGGCAAGATCAAATATATTGATATGCATCATATTAATGGTTCAAAGATGgatatagtaataatatatttaCTGTGAGCCAGTGAGCAATTTTCAAGTTCAGAAACAGCTGCCATTGTGCAAACAGAACAACTGGAGAGAAACAGTGAATTTCATACCCCAGAACCTACAGGAACAAATAATGTAATGTACTGATGATGATTTAATGTTGCATTGCATCATGCAAAGAGCAAATCTGTTTAAATCCAGTGAAATGGTATGAAAAGGTTTAGAGTAGAACTGGCACAATACTAGTATGCATATCTTCGCatgtatctgtgtgtttgtgatgtGTGTCAAAGTTGGTCTGAATGtacccttgatttttttttttactttaaaatgactTTACAATTATAAATCAAGAAGTACAGATaaagaaaagaacaaataaaaaaaagtctgataAAAATATGCAGGATTCATGAAAAAATATATCTGCCAAATTTTATAcagttgtaaaataaaaaaacatactgtgGCTTATTTAAACCTCAGTCTCTATTTATAAAtcatggcattttttttttttcacatttatgcCTTAACTTCCATTTCACTCTTTTTAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021911 True 1760 lncRNA 0.30 2 17548791 17551059

Neighbor

gene id symbol gene type direction distance location
XLOC_009816 CR855317.1 coding upstream 31709 17516948 ~ 17517082 (+)
XLOC_009815 fam131bb coding upstream 81329 17389116 ~ 17467462 (+)
XLOC_009814 NA coding upstream 246272 17300153 ~ 17302519 (+)
XLOC_009813 gtf3c6 coding upstream 295402 17252487 ~ 17253389 (+)
XLOC_009812 cd27 coding upstream 447350 17089114 ~ 17101441 (+)
XLOC_009818 FP015958.1 coding downstream 19751 17570810 ~ 17570934 (+)
XLOC_009819 NA coding downstream 49818 17600877 ~ 17601900 (+)
XLOC_009820 NA coding downstream 114703 17665762 ~ 17666931 (+)
XLOC_009821 NA coding downstream 118241 17669300 ~ 17670457 (+)
XLOC_009822 si:dkey-87o1.2 coding downstream 163605 17714664 ~ 17719792 (+)
XLOC_009811 NA non-coding upstream 544416 17004014 ~ 17004375 (+)
XLOC_009807 NA non-coding upstream 834373 16708151 ~ 16714418 (+)
XLOC_009806 NA non-coding upstream 899916 16644679 ~ 16648875 (+)
XLOC_009826 NA non-coding downstream 951507 18502566 ~ 18512199 (+)

Expression


Co-expression Network