Gene
RNA
| Item | Value |
|---|---|
| gene id | G225738 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 1096479 ~ 1097143 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU256079 | True | 565 | lncRNA | 0.47 | 2 | 1096479 | 1097143 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_01063383_01064712 | NA | coding | downstream | 30763 | 1061690 ~ 1066035 (-) |
| CI01000053_00974193_00978185 | JAM3A | coding | downstream | 118294 | 973261 ~ 978185 (-) |
| CI01000053_00968102_00970741 | VPS26BL, V26BL, V26BB, VPS26B | coding | downstream | 124704 | 968043 ~ 971775 (-) |
| CI01000053_00956174_00961278 | ACAD8 | coding | downstream | 135201 | 956009 ~ 961278 (-) |
| CI01000053_00865420_00881846 | ROBO3, ROBO2 | coding | downstream | 214633 | 865373 ~ 881846 (-) |
| CI01000053_01124489_01129327 | NA | coding | upstream | 26616 | 1123759 ~ 1129359 (-) |
| CI01000053_01166907_01193322 | CADM1B | coding | upstream | 69333 | 1166476 ~ 1193322 (-) |
| CI01000053_01603290_01609575 | DIXDC1A, DIXDC1 | coding | upstream | 505785 | 1602928 ~ 1609575 (-) |
| CI01000053_01629699_01639689 | NA | coding | upstream | 532143 | 1629286 ~ 1639763 (-) |
| CI01000053_01655618_01660681 | NA | coding | upstream | 558405 | 1655548 ~ 1660737 (-) |
| G225721 | NA | non-coding | downstream | 9005 | 1068169 ~ 1087474 (-) |
| G225698 | NA | non-coding | downstream | 29928 | 959590 ~ 1066551 (-) |
| G225715 | NA | non-coding | downstream | 58709 | 1028249 ~ 1037770 (-) |
| G225581 | NA | non-coding | downstream | 140816 | 955390 ~ 955663 (-) |
| G225731 | NA | non-coding | upstream | 172381 | 1269524 ~ 1298052 (-) |
| G225732 | NA | non-coding | upstream | 176160 | 1273303 ~ 1280145 (-) |
| G225725 | NA | non-coding | upstream | 188283 | 1285426 ~ 1289957 (-) |
| G225813 | NA | non-coding | upstream | 262681 | 1359824 ~ 1407253 (-) |
| G225840 | NA | non-coding | upstream | 314659 | 1411802 ~ 1479222 (-) |
| G225574 | NA | other | downstream | 549611 | 543647 ~ 546868 (-) |
| G225812 | NA | other | upstream | 362452 | 1459595 ~ 1466732 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | other | upstream | 1120305 | 2225210 ~ 2226481 (-) |
| G226826 | NA | other | upstream | 1468749 | 2565892 ~ 2567072 (-) |
| G226963 | NA | other | upstream | 1899574 | 2996717 ~ 2997268 (-) |
| CI01000053_03551506_03551965 | NA | other | upstream | 2453190 | 3550333 ~ 3552847 (-) |
