Gene
RNA
| Item | Value |
|---|---|
| gene id | G225888 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 1549507 ~ 1549859 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU256244 | True | 353 | lncRNA | 0.39 | 1 | 1549507 | 1549859 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_01166907_01193322 | CADM1B | coding | downstream | 356185 | 1166476 ~ 1193322 (-) |
| CI01000053_01124489_01129327 | NA | coding | downstream | 420148 | 1123759 ~ 1129359 (-) |
| CI01000053_01063383_01064712 | NA | coding | downstream | 483791 | 1061690 ~ 1066035 (-) |
| CI01000053_00974193_00978185 | JAM3A | coding | downstream | 571322 | 973261 ~ 978185 (-) |
| CI01000053_00968102_00970741 | VPS26BL, V26BL, V26BB, VPS26B | coding | downstream | 577732 | 968043 ~ 971775 (-) |
| CI01000053_01603290_01609575 | DIXDC1A, DIXDC1 | coding | upstream | 53069 | 1602928 ~ 1609575 (-) |
| CI01000053_01629699_01639689 | NA | coding | upstream | 79427 | 1629286 ~ 1639763 (-) |
| CI01000053_01655618_01660681 | NA | coding | upstream | 105689 | 1655548 ~ 1660737 (-) |
| CI01000053_01720326_01736077 | NA | coding | upstream | 170439 | 1720298 ~ 1736077 (-) |
| CI01000053_01759982_01765920 | NA | coding | upstream | 208826 | 1758685 ~ 1766084 (-) |
| G225886 | NA | non-coding | downstream | 4320 | 1544851 ~ 1545187 (-) |
| G225884 | NA | non-coding | downstream | 5765 | 1543528 ~ 1543742 (-) |
| G225809 | NA | non-coding | downstream | 18505 | 1529142 ~ 1531002 (-) |
| G225840 | NA | non-coding | downstream | 70285 | 1411802 ~ 1479222 (-) |
| G225813 | NA | non-coding | downstream | 142254 | 1359824 ~ 1407253 (-) |
| G226513 | NA | non-coding | upstream | 70077 | 1619936 ~ 1622818 (-) |
| G226606 | NA | non-coding | upstream | 192601 | 1742460 ~ 1742765 (-) |
| G226609 | NA | non-coding | upstream | 198021 | 1747880 ~ 1748087 (-) |
| G226614 | NA | non-coding | upstream | 226591 | 1776450 ~ 1776658 (-) |
| G226553 | NA | non-coding | upstream | 379980 | 1929839 ~ 1931337 (-) |
| G225812 | NA | other | downstream | 82775 | 1459595 ~ 1466732 (-) |
| G225574 | NA | other | downstream | 1002639 | 543647 ~ 546868 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | other | upstream | 667589 | 2225210 ~ 2226481 (-) |
| G226826 | NA | other | upstream | 1016033 | 2565892 ~ 2567072 (-) |
| G226963 | NA | other | upstream | 1446858 | 2996717 ~ 2997268 (-) |
| CI01000053_03551506_03551965 | NA | other | upstream | 2000474 | 3550333 ~ 3552847 (-) |
| G227604 | NA | other | upstream | 2537378 | 4087237 ~ 4087740 (-) |
